Cupriavidus oxalaticus: E0W60_23005
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Entry
E0W60_23005 CDS
T06004
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03420
Nucleotide excision repair
cox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E0W60_23005
03430 Mismatch repair
E0W60_23005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_23005
Enzymes [BR:
cox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0W60_23005
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0W60_23005
MMR (mismatch excision repair)
Other MMR factors
E0W60_23005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_22
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
QBY53911
UniProt:
A0A4P7LNL0
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All DBs
Position
2:complement(2630509..2632857)
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AA seq
782 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLLQNGRVSPAGILAVTF
TNKASKEMQTRLQSMLPINTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
LKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDMQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGHGTQN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRLIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVYQAGTDGQEAGWIIEEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSAGIPYRVYGGLRFFERAEIKHALAYMQLLENPRNDAAFGRVVNFPARGIG
ARSLEVLQDMARQYDCALSEAVAYVPGAAGSKLAAFTRLIDKMRDDTRRMTLAETVEYMI
NTSGLITHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLDALAAVIPADRAPAMPVLAD
GDQSQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVF
ITGLEEGLFPHENSMMDPDGLEEERRLMYVAITRARERLFLSFAQSRVLHGQTKYHVRSR
FFEELPEEALKWLTPAVQGYGGVRRQERDNAWGRDWFRKPEDVPYTGTRPTGGMDKGNGY
ADAKREAGTGLRVGQSVFHNKFGEGVITALEGEGNDARANIKFKRHGAKWLALSVAKLDA
ID
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgccaacctcaatgccgaacaacttgccgccgtcacactgcctgac
gagccggcgctgatcctggcgggcgcgggcagcggcaagacccgcgtgctgaccacgcgc
atcgcctggctgctgcagaacggccgggtctcgccggcgggcatcctggcggtgaccttc
accaacaaggcctcgaaggaaatgcagacgcggctgcagtcgatgctgccgatcaacacc
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatttc
cgcgatgccgggctgccgcagacctttgccatcctggacagccaggaccagctttcggcg
ctcaagcggctgctcaagtcgctcaacgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacaacgccaaggagcagggcctgcgcccggccgacgtcgaggccaac
gacgacttcaacaagcgcttcgtcgacctctacgccgcctacgacatgcagtgccagcgc
gagggcgtggtcgactttgccgagctgctgctgcgctgctacgaactgctgcgctataac
gacgcgatccgccagcactaccagcaccgcttccgccatgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggccggccacggcacgcagaac
ccggccgcggtctttgccgtgggcgacgacgaccagagcatctacgccttccgcggtgcc
aatgtcggcaatatgcgcgacttcgagcatgagttccgcgtgcgccggctgatcaagctg
gagcagaactaccgctcgcacgggcatatcctggattctgccaaccacctgatctcgcac
aacgcgcgccgcctgggcaagaacctgcgcaccgacgccggccatggcgagccggtgcgc
gtgtaccaggccggcaccgacggccaggaagcgggctggatcatcgaggaaatccgcgac
cagatcgcgcagggcgccagccgcgccgagattgccatcctgtaccgcagcaacgcccag
tcgcgcgtgatcgaacacgcgctgttctccgccggcatcccgtaccgcgtctatggcggc
ctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcgtatatgcagctgctggaa
aatccgcgcaacgatgccgccttcggccgcgtggtcaacttcccggcgcgcggcatcggc
gcgcgttcgctcgaggtgctgcaggacatggcgcggcagtacgattgcgcgctgtccgag
gccgtggcctacgtgcccggcgcggccggcagcaagcttgccgcgttcacgcgcctgatc
gacaaaatgcgcgacgacacccgccgcatgacgctggccgagaccgtcgagtacatgatc
aacaccagcggcctgattacccactaccagggcgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgactgccgcgcaggccttcgtggtggaagagggctacgggctg
gatgcgctcgctgcggtgattcccgcggatcgtgcgcccgccatgccggtgctggccgac
ggcgaccagtcccagcaggtgctcgaccccgaggcgctgccggtggtgatgacaccgctg
gtcgcgttcctgacgcatgcctcgctggaggccggcgacaaccaggcccaggccggccag
gacgcggtgcagatgatgacggtgcacgcggccaaggggctggagttcgatgtggtcttc
atcaccgggctggaagaaggcctgttcccgcacgagaacagcatgatggaccccgacggg
ctggaagaagaacgccgcctgatgtacgtggcgatcacgcgcgcgcgcgagcgcctgttc
ctgtcgttcgcgcagagccgcgtgctgcatggccagaccaagtaccacgtgcgctcgcgc
ttcttcgaggaactgcccgaggaagcgctcaagtggctgacgcccgcggtgcagggctac
ggcggcgtacgccgccaggaacgcgacaatgcctggggccgcgactggttccgcaagccg
gaggatgttccctacaccggcacgcgcccgaccggcggcatggacaagggcaacggctat
gccgacgccaagcgcgaggcgggcaccggcttgcgcgtgggccagtcggtgttccacaac
aagtttggcgaaggcgtgatcaccgcgctggagggcgaaggcaacgacgcccgcgccaat
atcaagttcaagcgccacggcgccaagtggctggcgctgtcggtggcgaagctggacgcg
atcgactga
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