Cupriavidus oxalaticus: E0W60_24900
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Entry
E0W60_24900 CDS
T06004
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cox
Cupriavidus oxalaticus
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cox03016
]
E0W60_24900
Enzymes [BR:
cox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E0W60_24900
Transfer RNA biogenesis [BR:
cox03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E0W60_24900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QBY54262
UniProt:
A0A4V1BZ67
LinkDB
All DBs
Position
2:complement(3036790..3038904)
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AA seq
704 aa
AA seq
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MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAIELVRQTGDM
VAEIDLDFLWECAPEAEFGFAELAAEYYGAEPGAVQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAALERKRQQALVQAEYEEQLKALTLPESFRNKVLQLLFKPDKNSLEYKA
MDAACTALGMTPMRLMVAVGGVASARALHEAKFLAECFPKGTGFPDTDVPEPPADLPLAE
VEAFSIDDVTTTEIDDALSVTKLPDGKLRIGIHIAAPALGIRRGEALDVIARQRLSTVYF
PGDKITMLPDPVVERYTLQEGRVCPALSLYVTVDPTVWLITGSETRAEMVPISANLRHNL
LDDVITEASLADGTGDYPFREALTQLWHFAGYLYDERQKARLASGLRPETHNRADFNFYL
DDQDDGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADNGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVQQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYADHQSTMERYWCLRWLKQENRERLVAAVLKEGAVRFTEIPLVTRVPE
LVQAQRGTQVLLEIGETDEITLEVSCRVLEIFAGEGVLPEEELESDEEAAEMSAEAAAEA
AAEDAAEQAAGASEEAAAEAPAEAGGNVPAEPSAERDTGGTAAG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagatccgcgccggcaccgtgctgaaccagcag
ggcgaggcttaccaggtggagctgccggccggcaagcgcaccaaggtcaagtcgcgcgac
gtgctgctgcagtttgcgcagccgtcggcgatcgagctggtccgccagaccggcgacatg
gtggccgagatcgacctggacttcctgtgggaatgcgcccccgaggccgagttcggcttt
gccgagctggccgccgagtattacggcgccgagcctggcgcggtgcagcaggcggcgctt
gcgatggcgctgcacggcaacccggtgtacttccgccgcaaggggcgtggccgctaccag
cgcgcgcccgaggaccagctcaaggccgcgctggccgcgctcgagcgcaagcgccagcag
gcgctggtccaggccgaatatgaagaacagctcaaggcgctgacgctgccggaatcgttc
cgcaacaaggtgctgcaactgctgttcaagccggacaagaacagcctggaatacaaggcc
atggacgcggcctgcaccgcgctcggcatgacgccgatgcggctgatggtggccgtcggc
ggcgtcgccagcgcacgtgcgctgcacgaggccaagttcctcgccgagtgctttccgaag
ggcaccggcttccccgataccgacgtgcccgagccgcccgccgacctgccactggccgag
gtcgaggcgttctcgatcgacgacgtcaccaccacggagatcgacgatgcgctgtcggtg
acgaagctgcccgatggcaagctgcgcatcggcatccatatcgccgcgcccgcgctgggt
atccgccgaggcgaggcgctcgacgtgatcgcgcgccagcgcctgtctacggtgtacttc
ccgggcgacaagatcaccatgctgcccgacccggtggtcgagcgctacacgctgcaggaa
ggccgggtttgcccggccctgtcgctgtatgtgacggtggacccgacggtctggctgatc
accggcagcgagacccgcgccgagatggtgccgatctccgccaacctgcgccacaacctg
ctcgacgatgtcatcaccgaggcctcgctcgccgacggcaccggcgactacccgttccgc
gaggcgctgacccagctgtggcacttcgccggctacctgtacgatgagcgccagaaggcg
cgcctggccagcggcctgcgccccgagacacacaaccgcgccgacttcaacttctacctc
gacgaccaggacgacggcagccagcgcgtgcgcatcgagcagcgcaagcgtggctcgccc
ttggacaagatcgtggccgagctgatgatcctggccaacagcacgtggggcaagctgctg
gcggacaacggcgtaccgggcatctaccgcacgcagaaggcgtggggcatgcaccgcacc
cgcatgcagacctacccggcgccgcacgaaggcctgggcgtgcagcagtacgcgtggagc
acctcgccgctgcgccgctacgtcgacctggtcaaccagtggcagatcctggcggtggcg
cagcacggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgacctgctg
gctgccgtggccgacttcgaaggcacttatgccgcctatgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctcaagcaggagaaccgcgagcgcctggtcgccgca
gtgctcaaggaaggcgcggtgcgctttaccgagatcccgctggtcacgcgcgtacccgag
ctggtccaggcgcagcgcggcacccaggtgctgctggagatcggcgagaccgacgagatc
acgctggaagtctcgtgccgcgtgctggaaatctttgccggcgagggtgtgttgcctgaa
gaagagctggaaagcgacgaggaagccgctgaaatgtcagccgaagccgctgccgaggct
gctgcggaagacgctgccgagcaggccgcgggggcctcggaagaggctgccgcagaagcc
cccgcagaagccggtggcaacgtgccggcggagccgtcggctgagcgcgacaccggcggc
accgccgcgggctga
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