Cupriavidus oxalaticus: E0W60_26640
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Entry
E0W60_26640 CDS
T06004
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0W60_26640 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cox03019
]
E0W60_26640 (recQ)
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_26640 (recQ)
Enzymes [BR:
cox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0W60_26640 (recQ)
Messenger RNA biogenesis [BR:
cox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E0W60_26640 (recQ)
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E0W60_26640 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBY54565
UniProt:
A0A4P7LFS8
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All DBs
Position
2:complement(3413752..3415599)
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AA seq
615 aa
AA seq
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MSQALAILKDVFGYHAFRGRQAEIIDHVAEGGDSLVLMPTGGGKSLCYQIPALLRQRSGQ
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLTGSEASAVERDLLAGRVEILYVAPER
LMTPRFLDLLERTRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPYVPRIALTATAD
ALTRNEIIERLALDDARVFISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSG
IVYCLSRKKVEDTAAWLEGQGINALPYHAGMDPGTRQRHQARFREEEGLVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADE
AFKRVSSAKLDALLGLCETAGCRRQRILAYFDEASEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRIHFGATHLVDVLRGNASEKIKQWGHDKVSTFGIGKDRSVHEWHTVFRQ
LIAQGLLMIDHGGHGALLLGERAREVLRGERQIILRRQAAKPAKSGERAARGNRIDHTAD
MDADTLANWEALRRWRTEAAREHGVPAYVIFHDATLAELARTAPDSLSAMQGIPGIGASK
LERYGQGILDTLRGV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcactggcgatcctcaaggatgtcttcggctaccacgccttccgcgggcgc
caggccgagatcatcgaccacgttgccgaaggcggcgacagcctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagattccggcactgctgcgccagcgctcagggcag
ggcgtcggcatcgtggtatcgccgctgatcgcgctgatgcaggaccaggtcgcggcgctg
accgaagccggcgtgcgcgccgcggtactgaattcgacgctgaccggttcggaagcgtcc
gccgtcgagcgcgacctgctcgccggcagggtggagatactctacgtcgcacccgagcgg
ctgatgacgccgcgcttcctcgacctgctcgagcgtacccgcgtcgggctgttcgccatc
gacgaggcgcattgcgtatcgcagtggggccacgatttccggccggagtacatccagctg
tcggtgctgcacgaacgcttcccgtacgtgccgcgcatcgcgctgaccgcgaccgccgac
gcgctgacgcgcaacgagatcatcgagcggctggcgctcgacgacgcccgcgttttcatc
tccagcttcgaccggccgaatatccgctaccgcatcgtcgagaaggacaatgcgcgccag
cagttgctggcctttatcaaggccgagcacaccgccgccgacggcacacacgacagcggc
atcgtctactgcctgtcacgcaagaaggtggaagacaccgcggcgtggctggaagggcag
ggcatcaacgcgctgccttaccatgccggcatggaccccggcacgcgccagcgccaccag
gcacgcttccgcgaagaagaagggctggtgatggtggccaccattgccttcggcatgggg
atcgacaagccggacgtccgcttcgtcgctcaccttgacctgcccaagagcatggaaggc
tactaccaggagacgggacgcgccgggcgcgacggattgcccgccaatgcctggatggcc
tacggcctgggcgacgtggtgcagcagaagcgcatgatcgacgagtcggaggcggacgag
gcgttcaagcgcgtgtcgtcggccaagctcgatgcgctgctgggtttgtgcgaaaccgcc
ggctgccggcgccagcgcatcctcgcgtacttcgacgaagccagcgagccctgtggcaac
tgcgacacctgcctggagccgccggccacctgggatggcacgcgcgaggcgcagatggcg
ctgtcttgcgtgtaccgcaccgcgcaggcaagccgcatccactttggtgcgacccacctg
gtcgacgtgctgcgcggcaatgcctcggaaaagatcaagcagtggggccatgacaaggta
tcgaccttcggcatcggcaaggaccgatcggtgcatgaatggcacacggtcttccgccag
ctgatcgcccagggtctgctgatgatcgaccatggcggtcacggcgcgctgctgctgggc
gaacgcgcgcgcgaggtgctcaggggcgagcgccagatcatcctgcgacgccaggctgcc
aagccggccaagtccggcgagcgcgcggcgcgcggcaaccgcatcgaccataccgcggac
atggacgccgatacgctggccaactgggaggcgctgcgccgctggcgcaccgaggccgcg
cgcgagcacggcgtgccggcctacgtgattttccacgacgccacgctggccgaactggcg
cgcacggcgccggactcgctgtcggcgatgcagggcattcccgggattggtgcatccaag
ctggagcgctacgggcagggcatcctcgacaccctgcgcggggtctag
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