Cupriavidus oxalaticus: E0W60_35970
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Entry
E0W60_35970 CDS
T06004
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cox
Cupriavidus oxalaticus
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_35970
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E0W60_35970
Archaeal homologous recombinant proteins
E0W60_35970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
AAA_22
AAA_15
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QBY56404
UniProt:
A0A4P7LJH9
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Position
unnamed4:291164..293488
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AA seq
774 aa
AA seq
DB search
MRPLKLMLTGFYGIRDGMKRDSVTLDLTTLPGGLIALVGPNGAGKTTIMDNLHPFPIMPS
HASKMSVDAFSYWDHLCAPRAEKDLEWEHGGKTYRSAFAFRNPGRSRKAEYYLFEKDAES
DWKPLQLPDGTLSDGKAETYNRCLEAVLGSPEAFFTSVFSAQNRRPLASYQAGEIKKLLA
ELLGIEHLRDLSAKAGEVGKLLTRSLDTLQRDVLTLTGKRDRAAVVAKEIWQVGESLDAQ
REARELETAKGVKLMQERATLAAKQEANAGTEARLRELNQRKGELEQRAVLLASDERAAA
GRAAVRRRDLDRNAASHRAVLAEASAIESAAGERDALQLAIGRKQAELVSQQATVEKLDA
VQVEHAALSSELKGLEQRGASAAQLVKSLKLQADVIETVPCRNDPMHATCPLLAQARNAK
ASLSEQAVTVEALRDSYRKKLAHAQSMEETLADRAKARNASAALRSDLERDQQSLQRLTA
LAARRPMLDAAREGLAQADRDLTTLTEEGALRADRHKRDVADVQAQLDAVRRELASLATE
DVTGMLAQLDRQIAVSREAGAAIAGRIEALIRQESTLTAERERLDAELAGLPAAEAKVQA
LSDKIAQWKLLAKGLGNDGVIALSIDDAGPAITQIVNDLLLACYGPRFTIAIQTQTELAN
GEKREGFAIDVIDADNDSTKDFSVMSGGQKVWINECLTRGIALYRSQDAQQPFQTLFTDE
ADGPLDPERKRAFMRMKREVLRLGGYEREFFISQTPDLVDEADGVIDVVALAAQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccactgaaactgatgctcaccggattctatgggatccgcgacggcatgaagcgc
gatagcgtcacattggacctgacgacgctgccgggggggctgatcgcccttgtcggcccc
aacggggctggcaagaccacgatcatggacaacctgcacccgtttcccatcatgccgagc
cacgcaagcaagatgtcggtcgacgcgttctcgtactgggaccatctctgcgccccgcgc
gcggagaaggatctggagtgggagcacggtggcaagacgtatcgctccgcgttcgcgttc
cgcaatcctggcaggagccgcaaggccgagtactacctgttcgagaaggacgctgaaagt
gactggaagcccctgcagttgcctgacggtacgctgtcggacggcaaggcggagacctac
aaccggtgtctggaggccgtgctggggtcgcccgaggcgttcttcaccagcgtgttttct
gcccagaaccgtcgaccgctcgccagttaccaggccggcgagatcaagaaactgcttgcc
gagctgctcgggatcgagcacctgcgcgacttgtccgcgaaagcgggggaggtaggcaag
ctgctcacccgctcgctggacactctgcagcgcgacgtgttgaccctcacgggaaagcgc
gatcgtgccgcggtagttgccaaggagatctggcaggttggggaaagcctggatgcccag
cgcgaggccagggagctggaaacagccaagggtgtcaagctgatgcaggagcgcgcgacg
ctggctgcgaagcaggaggccaatgccggtaccgaagcgcggttgcgggaattgaatcag
cgcaagggcgagttggagcagcgtgcggtattgctggccagcgacgaacgggcggctgcc
ggccgtgctgcggtgcgccgacgcgatctggaccgaaatgcggcaagccaccgcgcagtg
ctggcggaggcctctgccattgaatcggctgccggcgagcgggatgccttgcaacttgcc
atcggccggaagcaggcggaactggttagccagcaggcgactgttgagaagctcgatgcg
gtgcaggtcgagcacgcagcgctcagttccgagctcaagggcctggaacaacgcggtgcc
tcggcggcgcagttggtcaaatcgctcaagctgcaggccgacgtcatcgagactgttcct
tgccggaacgacccgatgcatgccacctgcccgttgctggcacaagcccggaatgccaaa
gcgagcctcagtgagcaagccgtgacagttgaggcgcttcgcgacagctatcgcaagaag
ctggcgcacgcgcagtcgatggaggaaacgcttgccgaccgcgcaaaggcgcggaatgct
tccgcggcgctgcgatccgacctggagcgcgatcagcaatcgctgcagcgtctcacggcg
ctggcggccaggagacccatgctcgacgccgcgcgcgaaggactggcgcaggccgaccgc
gatctgaccaccttgactgaggaaggcgcgttgcgcgcagaccgccacaagcgggatgtt
gcggacgtgcaagcccagcttgacgcggtgcgaagggaactggcatcgctggccacagag
gatgtgaccggcatgctggcccagctggaccgccagatcgctgtcagccgggaggctggc
gctgccatcgccggccggatcgaagcgctgatccggcaggagagcacgctgacggcggaa
cgcgagcgcctggatgccgagctcgccggcttaccggcagcagaggccaaagtacaggcg
ctgtccgacaagatcgcgcagtggaagctgttggcgaaaggcttgggcaacgatggcgtg
atcgcgttgtccatcgatgacgcgggcccggccatcacgcaaatcgtcaatgacctattg
ctggcctgctatggaccgcgattcaccatcgcgattcagacgcagaccgaattggccaac
ggcgagaagcgggagggatttgccattgatgtgatcgacgccgacaacgacagcacgaag
gatttctccgtgatgtcaggtggacaaaaggtgtggatcaatgagtgtctgacgcgtgga
atcgccctttaccggtcgcaggacgcgcagcagccgtttcagaccctctttactgacgag
gccgatggccccttggatccggagcgcaagcgcgccttcatgagaatgaagcgcgaagtg
ctgcggctgggcggctacgaacgagagttcttcatctcgcaaacgccggatctggtcgac
gaagctgacggtgtcatcgatgtagttgccctggcggcgcagtaa
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