Cupriavidus oxalaticus: E0W60_36115
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Entry
E0W60_36115 CDS
T06004
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03030
DNA replication
cox03430
Mismatch repair
cox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0W60_36115
03430 Mismatch repair
E0W60_36115
03440 Homologous recombination
E0W60_36115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cox03032
]
E0W60_36115
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_36115
Enzymes [BR:
cox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0W60_36115
DNA replication proteins [BR:
cox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E0W60_36115
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E0W60_36115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QBY56426
UniProt:
A0A4P7LJV7
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All DBs
Position
unnamed4:complement(322872..323480)
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AA seq
202 aa
AA seq
DB search
MQTVAVLDFETTGLSPSFGDRATEIAVILLRDGEIVDRYQSLMNARRRIPSQVVSLTGIS
NDMIANAPAASKVMREAARFVGRHPVVAHNAGFDRRFWQAELGLLDIAANQHFACTMLTS
RRIYPHANNHRLSTLVEMLQLPKAGRAHRAMADAEMTCHLWHRLQRDIAQTYGVSQVDYA
LIARVQATSRAKVPTLLRSLGE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggtcgcggttctggattttgaaacgacgggattgtcgccaagtttcggtgac
cgagccacggaaattgctgtcatcttgctgcgcgacggcgagattgtcgaccgttatcaa
agcttgatgaacgcgcgaaggcgtatcccctcgcaggttgtgagcctgaccggaatcagc
aatgacatgatcgcaaatgcgcctgccgcatcgaaggtcatgcgtgaagcggccaggttt
gtcggcagacatccggtggtagcccacaatgctggttttgaccgtaggttttggcaagcc
gagcttgggcttctggacatcgcagccaatcagcacttcgcgtgtacgatgctcacttcc
agacgtatctacccacacgctaataatcacaggttatctacactcgtcgaaatgctgcaa
ttgcccaaggcagggcgtgcgcacagagcgatggccgacgctgaaatgacctgccatctt
tggcatcgattgcaacgcgatatcgctcagacgtacggggtgagccaagtcgattacgcg
ctcatcgcccgtgttcaggccaccagccgcgcaaaggtaccgacgttgcttcgttcgctg
ggcgagtga
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