Chitinophaga oryzae: HF329_01320
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Entry
HF329_01320 CDS
T07451
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coy03016
]
HF329_01320
Enzymes [BR:
coy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HF329_01320
Transfer RNA biogenesis [BR:
coy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HF329_01320
Prokaryotic type
HF329_01320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QJB30020
UniProt:
A0AAE6ZD47
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All DBs
Position
306183..307064
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AA seq
293 aa
AA seq
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MKALTITGYSTALFSTWYFVEELGLLLDAGDGVSATLLQKSRKISHVFISHADRDHLTGL
LQLNQLNARDGFPVICYPRDGGSYPALEAFSKRFDPHVSGTVWMPVAPGDEIRIKEDILV
VPLRNEHVRAAPDVVRSLGYKVMQTRRKLRPELVGLTQEDIRRIGKEQGKEKTTMEVRRN
ILCYSGDTPVASPETWQDAEILIHEATFLGGDEVIEHPSYKNLHSRLEEVIEMVSATNVQ
QLVLGHFSSRYAPEQIDRSIRQLCERHALNIPVFRVLPGQTVRDILNNTPVYK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttaacgattaccggctattccacggctttgttttccacctggtattttgta
gaagagctgggcctcctgctggacgcgggagacggcgtaagtgccactttgttgcagaaa
agcagaaaaatcagccatgtatttatttcccatgccgacagggaccatctgactggtttg
ttacaactcaaccagctgaatgcacgggatggctttccggtgatctgttaccccagggac
ggaggttcctacccggcgctggaagctttcagcaaacggtttgacccgcatgtatcaggc
acggtatggatgccggtagcgcccggcgatgaaatccgcatcaaggaggacatactggtg
gtgccgctgcggaacgaacatgtacgcgccgcccctgatgttgtgcgcagcctggggtat
aaggtgatgcaaacgaggcgcaagttacggcccgaactggtggggctaacgcaggaggat
atacgaaggatcggcaaggagcagggcaaggaaaagaccacgatggaagtgcgccgtaat
attctctgctattccggagatacgccggtcgccagcccggagacctggcaggacgcagaa
attttgattcacgaagctactttcctgggcggggacgaagtcatcgaacatccttcctac
aagaacctgcacagccggctggaggaggtgatagagatggtaagcgccactaatgtgcag
cagctggtactggggcatttctcttcgcgttatgcgccggagcagatagatcgaagcatc
cggcagctgtgtgaaaggcatgcgttgaatatccccgtgttccgggtgctgcccggacaa
accgtgagggatatactgaataacactcctgtatacaaataa
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