Chitinophaga oryzae: HF329_01800
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Entry
HF329_01800 CDS
T07451
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
coy
Chitinophaga oryzae
Pathway
coy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF329_01800 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_01800 (xth)
Enzymes [BR:
coy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HF329_01800 (xth)
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HF329_01800 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QJB30110
UniProt:
A0AAE6ZDA3
LinkDB
All DBs
Position
408689..409465
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AA seq
258 aa
AA seq
DB search
MKIATYNVNGINARLPVLLRWLKESAPDVACLQELKAPQEKFPESAIREAGYDVIWHGQK
SWNGIAILSKVGKPQEIRRTLPGDEEDVHSRYMEAAINGVLIGCLYLPNGNPAPGPKFDY
KLSWFKRLTDHAKELLAQKTPVILTGDYNVMPTDLDVYKPERWVDDALFRPEVKSAFHAL
VAQGWTDAIRKLYPDQKIYTFWDYFRNAYERDAGLRIDHFLLSPEVDKRLIAAGVDRHVR
GWEKSSDHAPVWVELKGA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttataatgtcaatggtatcaatgcccgtttgccggtgctgctacgc
tggctgaaagagtctgcccctgacgtggcttgtctgcaggaactgaaagcgccgcaggag
aagttccccgaatcggccatccgggaagcaggatatgatgtgatatggcatggccagaaa
agctggaatggtattgcgatcctgtcgaaagtgggaaagccgcaggaaatcagaagaacg
ctgccgggagatgaggaagatgtgcacagccggtatatggaagcggctatcaacggcgta
ctgatcgggtgcctgtacctgcctaatggcaatcctgcaccgggacctaaattcgattat
aagctcagctggtttaaacggctgacggaccacgcaaaggaactgcttgcgcaaaaaaca
ccggtcatccttacgggcgattataatgtgatgcctaccgacctcgatgtgtataagccg
gagcgctgggtagacgacgccctgttcaggccggaagtgaaatcagctttccatgcgctg
gtagcacagggatggacagacgctatccgcaagctgtatccggatcagaagatctatact
ttctgggattactttcgtaatgcctatgaaagggatgccggcctgcggatcgatcatttt
ctgctgagccccgaggtagataaacgcctgatagcggcgggcgtcgaccgtcatgtgcgg
ggatgggagaagtccagcgatcatgcgccggtatgggtggaattaaaaggcgcgtaa
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