Chitinophaga oryzae: HF329_02800
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Entry
HF329_02800 CDS
T07451
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coy03009
]
HF329_02800 (rimO)
Enzymes [BR:
coy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HF329_02800 (rimO)
Ribosome biogenesis [BR:
coy03009
]
Prokaryotic type
ribosomal protein modification factors
HF329_02800 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Phage_int_SAM_6
Motif
Other DBs
NCBI-ProteinID:
QJB30285
UniProt:
A0AAE7D5K0
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All DBs
Position
636493..637800
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AA seq
435 aa
AA seq
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MKTKTLKKDKVNIITLGCSKNMVDSEVLSGQLLANEIDVVHESTKRDHNIVVVNTCGFID
KAKEESINTILEQVELKQRGKLDKVYVTGCLSERYRGDLESEIGGVDAWFGTMELPLLLK
KFDADYKSELIGERLLSTPSHYAYLKIAEGCNRTCSFCAIPLMRGGHVSRPIEELVKEAE
KLVRSGVKEIMLIAQELTYYGLDLYKQRRLADLMRALAGVEGLEWIRLHYAYPTKFPMEV
LDVMNEFPNICNYLDMPLQHASNAMLKAMKRQITREEIEELVHQIRAKVPGICLRTTLIA
GFPGETEDDVEELKGFLERMRFDRVGVFTYSHEEGTSAYELEDNIPAEEKERRAQEIMEV
QQEISLEKNQERVGKVLKVIVDKKEAGRYLARTEFDSVEVDNEVIINTTKRLKPGEFVNV
RITKAFDYDLEGELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgaaaactttaaagaaagacaaggttaacattattacgcttggttgttcgaag
aacatggttgactcagaagtgctgagcgggcaactgctggccaatgagatcgatgtggtg
catgaaagcaccaaacgcgatcataatatcgtggtcgtgaatacctgcggatttattgac
aaagccaaagaagaatccatcaataccatcctggaacaggtagaactgaagcaacgcgga
aagctggacaaagtatatgtgaccggctgtctgagtgagcgttaccggggcgacctggaa
tcggagattggcggcgtggacgcctggtttggcaccatggaactgccgttgctgctgaag
aaattcgatgcggattacaaatcagaactgatcggcgaacgtttgctgagcactccttcc
cactatgcttacctgaagattgcagaaggttgcaaccgtacctgctctttctgtgccatt
ccgctgatgcgcggtggtcacgtatcccgtcctatagaggaactggtgaaagaagcggag
aaactggtccgttccggtgtgaaggaaattatgctgattgcacaggagctgacctattat
ggcctggacctgtacaaacagcgccgtctggctgacctgatgcgcgcactggccggcgtg
gaaggcctggaatggatacgccttcactatgcttatccgactaagttcccgatggaagtg
ctcgacgtcatgaacgagttccccaacatctgcaactacctcgatatgcctttgcagcat
gcttccaacgctatgctcaaagccatgaaacgccagatcacccgggaagaaatcgaagaa
ctggtccaccagatccgcgccaaagtgcccggtatctgtctgcgtactaccctgatcgcc
ggtttccccggtgaaacggaagacgacgtggaagaactgaaaggtttcctcgaaagaatg
cgttttgacagagtgggtgtatttacctacagtcatgaagagggtaccagcgcctacgag
ctggaagacaacatccctgctgaagagaaagagcggagagcacaggagatcatggaagta
cagcaggaaatctccctggagaaaaaccaggaaagggtaggaaaagtattgaaagtcatc
gttgacaaaaaagaggccggcagatacctggcccgcacggagttcgactctgtggaagtg
gacaatgaggtgatcatcaataccaccaaacgcctgaaacccggcgaatttgtgaatgta
cgtatcactaaggcgtttgattacgaccttgaaggtgaactggtatag
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