Chitinophaga oryzae: HF329_04670
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Entry
HF329_04670 CDS
T07451
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
coy
Chitinophaga oryzae
Pathway
coy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF329_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coy03021
]
HF329_04670
Transcription machinery [BR:
coy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HF329_04670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
UCR_14kD
HTH_24
Sigma70_r3
DNA_pol3_delta_C
HTH_7
CSTF_C
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QJB30630
LinkDB
All DBs
Position
complement(1120299..1120904)
Genome browser
AA seq
201 aa
AA seq
DB search
MSLQPLNNERQLLLQVSEGDETAFRQLLYAYSDRLGAFVYKITGSREVSQEIVQDIFIKV
WHKRTTLSAVTQLDNYLFIIARNLTYNHIRDQARIAVRYQTWLRDVENSDDMVLPAADEE
GLAQYLPLIDEAIDRLPPQQRKVFELARKQSLSHKQIAEQMQLSPESVKKYMKLALNTVR
EHVRDRMPFPVLLVLLLPVTY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattacagccactaaataatgagcggcagttactgctacaggtatctgagggcgac
gaaaccgctttccggcaactgctctatgcctatagcgaccgcctgggcgccttcgtttac
aaaatcaccggttcacgggaagtcagccaggagatcgtgcaggacatctttataaaggtc
tggcataaacggaccaccttatccgcagtaacacagctggataactatctctttatcata
gcgcgtaatcttacctataaccatatcagggaccaggcgcgaatagctgtcagataccag
acatggctccgggacgtggaaaacagcgacgacatggtgctccccgccgctgacgaagaa
gggctcgctcaatacctgccgctcatcgatgaggctatcgaccggttacctccgcaacaa
cggaaggtatttgagctggccagaaagcagtctttgtctcacaaacaaattgccgaacag
atgcagctgtcccctgaatctgtaaaaaaatacatgaagctggccttaaacaccgtgcgg
gagcatgtccgcgaccgtatgccctttccggtgctgctggtattattacttccggtcacc
tattaa
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