KEGG   Chitinophaga oryzae: HF329_05030
Entry
HF329_05030       CDS       T07451                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
coy  Chitinophaga oryzae
Pathway
coy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:coy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HF329_05030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:coy03021]
    HF329_05030
Transcription machinery [BR:coy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HF329_05030
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Sigma70_r2 GerE HTH_23 HTH_Tnp_ISL3 Xre-like-HTH HTH_28 HTH_17 HTH_10 HTH_24 PF0610-like_N HTH_36 HTH_AsnC-type HTH_11 UNC80_N HTH_38 PhyR_sigma-like BAR_4 HTH_DeoR ATG32_M
Other DBs
NCBI-ProteinID: QJB30696
LinkDB
Position
complement(1209529..1210092)
AA seq 187 aa
MRDYNAYSDAALLPLLKEGEVQAFNEVYTRYFRLLYQYAWNILDNEDECSDAVQEIFVWL
WEHRSTLEVTSLKGYLMAAVKYRLARIIQTSRRRAAILAANVELPTTTRIEEDFEVKELR
RVITEFSETLPQRAREIFHLSRVQHLSNKEIAALLGISEKTVENQITIALKKLRSDLSKK
MLSFLLL
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagggattataacgcgtacagtgatgcagcattgctacctttattaaaggaaggcgaa
gtacaggcctttaacgaggtgtatacccgctatttccgcctgctgtaccagtacgcctgg
aatatcctggacaacgaagatgagtgcagcgacgccgtacaggaaatatttgtatggctg
tgggagcatcgctccaccctcgaagtcacctcgctgaaaggctacctgatggccgccgtc
aaataccggctggcgcgcatcatccagacctcccgccgccgcgcggccatcctcgccgcc
aacgtggaactgcccaccaccacccgcatagaagaagattttgaagtaaaagagctgaga
agggtgatcaccgaattctccgaaacacttccacagcgcgcccgtgagatattccacctc
agccgcgtgcaacacctcagtaacaaagaaatcgccgccctcctgggcatctccgaaaaa
acggtggaaaaccagatcaccatcgccctgaaaaaactacggtcagacctgagcaaaaaa
atgctctccttcctgttgttgtaa

DBGET integrated database retrieval system