Chitinophaga oryzae: HF329_07015
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Entry
HF329_07015 CDS
T07451
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
coy
Chitinophaga oryzae
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Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CILP
Motif
Other DBs
NCBI-ProteinID:
QJB31063
UniProt:
A0AAE7D5W0
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Position
1686328..1689471
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AA seq
1047 aa
AA seq
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MKSICTLMLVVGAFLFIPFSYLHAQPRMLKGHVVAAGTNTALPGVTVQVKGASRGTTTDP
DGSFRIEVPGGPGSLIFSFVGYLTQEVPIGSQSTVDVTLQPDTRSLEQVVVTAMGIKKEK
RAIGYAIQDVSGADLMQSKQSNVVNALQGKVAGVQISSGGGAPGQGSRILIRGINSLDPT
RDNQPLFVIDGITMDNNTYTTGNADTRGMSNRAADINPDDIESISVLKGGAATALYGLRA
ASGAVIITTKSGKAGRTRVSFTTTAGFDKVGKTPDVQTQYSQGNNGQYDNQSFWPAWGPS
VEEARKLDPDHPASLYNNYKQAYNTGSQYRNTLAISGGTEKVVYAASLSQFNQNGIIPFS
NYQNYSARVNGDIRFSEKVKMGVALNYINSGGNRANADRYGEQIIYWSPRWNMRDYLKPD
GTQQTYGTTDNPIYTLYSNRFGDNVNRLIGNINFTYSPFKWLDILYRAGTDFYTDNRRHT
GPGPKGIAGEVVNTDNGFGFVNEYTLNQRSLSSTLILNFKNNITSKLTSDLKLGHDLFDR
RLKRLSTEGDTLDIPDLLIMQNAKKIVSSQYIENYYLIGVFGDWTLSWDRWLYLTLSGRT
DISSSLPVGKRAFFYPSVSLSYLFTDHLKIPESVLSYGKVRTSWARVGKDALPYNTGSGY
IPLINGPIDNNVIGWTRADRYGDARLKPEFTNTFEVGAELRFLQDRIGIDFAWYTSKSTD
LLIPVKLSSATGYEDFYTNAGSIRNRGVEIAFNATPIKKTKFQWDMRINFSANRNEVLSL
GQGLSEVVVGNQFGYAGSTATMKYIPGYPVGAIFGTSYLRYTGGQPDNSILIDYSRPLQI
AASGSQAGFPMINSSQKYLGNSQPKWIGAITNTFTYGPLSLSVLIDTRQGAKKYNQLANF
MSAFGESAITADRFSSKVFEGVLPDGTPNTQVVYLQQAKGPDGRNYGGGFYRNVYRGVTE
NFVENASWIRLRNVSLSWQLPSEFLSRTHLISAANLTLTGNNIWLHTKYTGFDPESSSLN
AGSNIDAFAGFTYPTTRSYMASLNVTF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatctgcacattgatgttggtggtgggcgctttcctgtttattcccttctct
tacttgcacgcccaaccccgcatgttaaaaggccatgtcgtagccgccggtaccaacacc
gccttacccggtgtaacagtccaggtaaaaggtgccagccgcggcaccaccacggatccc
gacggaagtttccgtatcgaagtgcccggcggcccgggcagcctcatcttcagctttgtg
ggatacctcacacaggaagtgcccatcggcagccagtccactgtcgacgtgacgctgcag
ccggatacccgcagcctggaacaggtagtggtcaccgctatgggcatcaaaaaggaaaag
cgggccatcggctacgccatccaggacgtgtcaggcgctgacctcatgcagtccaaacaa
tccaacgtggtcaacgcgctgcagggcaaagtcgccggcgtacagatctccagcggcggc
ggcgctcccggccagggctcccgcatccttatccgcggtatcaactcactggaccccacc
cgtgataaccagcccctttttgtaatcgatggcatcaccatggacaacaacacctacaca
acgggcaatgcggacacccgcggcatgagtaaccgcgccgccgacatcaacccggatgac
attgaaagtatctccgtcctcaaaggcggggcagccactgcattgtacggcctgcgtgcc
gccagcggcgccgtgatcatcaccaccaaatccggaaaggcaggacgcacccgcgtcagc
ttcaccaccaccgccggattcgataaagtgggtaaaacaccggacgtgcaaacgcaatac
agccagggtaacaacggtcagtatgacaaccagagcttctggccggcatggggcccctct
gtggaagaagcccgtaaactggaccccgaccacccggcttccctgtacaacaactacaaa
caagcctataacaccggctcccaataccgcaacacactggcgatcagcggcggtacggag
aaagtcgtgtatgcggcatcgttatcccagttcaaccagaacggtattatcccgttcagc
aactatcagaactactccgcccgcgttaacggcgatatccgcttcagcgaaaaagtaaaa
atgggcgtggccctcaactatatcaactccggtggtaaccgcgccaacgcagaccgctac
ggcgaacagatcatctactggtcgccccgctggaacatgcgcgactacctgaaaccggac
ggcacccagcagacctacggcactacagacaacccgatctataccctgtacagcaaccgg
ttcggggataacgtcaaccgcctgatcggtaatatcaatttcacctactcaccgttcaaa
tggctggacatcctctatcgcgcaggcaccgatttttatacggacaaccgccgccatacc
ggaccgggtcccaaaggcatcgcaggtgaggtggtcaacactgacaacggcttcggcttc
gtgaacgaatacacgctgaatcaacgatctctcagttccaccctcatcctgaacttcaaa
aataatatcacctccaaactgacgtccgacctcaagctgggacatgacctgtttgaccgc
cggctcaaacggctctctaccgaaggcgacaccctcgacatcccggacctgctgatcatg
cagaacgctaaaaaaatcgtctcctcccagtatattgaaaactactatctcattggcgta
ttcggggactggaccctgtcatgggaccgctggctctacctcacgctgtccggtcgtacg
gatatcagctcctcattgcctgttggcaaacgtgcgttcttctatccctccgtgagcctg
tcgtacctcttcaccgaccacctgaagataccggagagcgtactctcttacggcaaagtg
cgtacatcctgggcgcgggtaggtaaagacgcgctgccttataacaccggctccggctac
atcccgctcatcaacggccctatcgacaataacgtgatcggatggacccgcgccgaccgc
tatggcgatgcccggctgaaaccggagttcaccaataccttcgaggtgggcgccgaactg
cgcttcctgcaggaccgcataggcatcgactttgcctggtacacctccaaaagcaccgac
ctgctgatcccggtgaaactgtccagcgctaccggttatgaagacttttatactaacgcc
ggctccatccgcaaccgcggcgtggaaatagcttttaatgccaccccgatcaaaaaaaca
aagtttcagtgggacatgcgcattaatttctccgccaaccgcaacgaggtgctgagcctc
ggtcagggactctccgaagtggtggtgggcaaccagttcggatatgccggctccaccgct
accatgaaatacatccccggttaccccgtaggcgccatcttcggcaccagctacctgcgg
tataccggcgggcagccggacaacagcatcctgatcgactacagccgcccgctacagata
gcggccagcggcagccaggccggtttcccgatgatcaactccagccagaaatacctgggc
aattcacagcccaaatggatcggcgccattacgaacacctttacctacggcccgctcagc
ctctctgtgctgatagacacccgccagggcgccaaaaaatacaaccagctggccaacttc
atgtcggccttcggtgaatcggcgatcacggcagaccgcttctccagcaaagtgttcgaa
ggcgtattgcccgacggtacgcccaatacgcaggtagtatacctgcaacaggccaaagga
ccggatggccgtaactatggcggtggcttttatcgtaacgtatatcgcggcgtgacggag
aacttcgtggaaaatgcctcctggatacggttgcgcaacgtcagcctctcctggcagctg
ccatctgaattcctgtcccgcacccacctgatttcagcggccaacctgacgcttaccggt
aataacatctggttgcataccaaatacaccggcttcgatccggagtccagctccctgaac
gccggcagcaatatagacgccttcgccggcttcacgtacccgactacacgtagttacatg
gcctccctgaacgtcaccttctaa
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