Chitinophaga oryzae: HF329_07805
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Entry
HF329_07805 CDS
T07451
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
coy
Chitinophaga oryzae
Pathway
coy03030
DNA replication
coy03430
Mismatch repair
coy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF329_07805
03430 Mismatch repair
HF329_07805
03440 Homologous recombination
HF329_07805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coy03032
]
HF329_07805
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_07805
Enzymes [BR:
coy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF329_07805
DNA replication proteins [BR:
coy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF329_07805
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF329_07805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QJB31210
UniProt:
A0AAE6ZEJ4
LinkDB
All DBs
Position
1904674..1906044
Genome browser
AA seq
456 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAIYLFDGREVTQHYQTLVNPGVPIPYYIESLTGITNSM
VAEAPPFEAVAPLIHELLHDKIFVAHNVNFDYSFVKHHLAAAGLDLQCKKLCTVRLGRKI
FPGLPSYSLGNLCRHLEIPINGRHRAGGDAEATTKLFSLLLQHDKEKAIAGALKAGSKEQ
FLPPNLQPEVVKQLPEVPGVYYFHDLKGKVVYVGKAKDLKKRVNSHFTGHSASRQRQNFL
RTVCNITYQETGTDLMACILESVEIKRLWPAFNAAQKRVEFRYGFYLFEDQEGYLRLVIE
KKRKFSHPVHAFNLLIDGHRLLRALIRQFELCPRLCFLQKGGGTCAGKTAATCHGACEKL
EAPEAYNERVKAAIAFLQEQQPSVVILDKGRNTGEQSCILMEKGRFYGMGYVPVHLQTTD
AELLRPHLTQYPENEIIISLLRPYAGAGQQLASSQK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgcaattgtcgatatagaaactaccggaggccatgccagcgccaacggcatcacc
gaaatcgccatctacctgtttgatggccgggaagtcacacagcattaccagacgctggtt
aatcctggagtgcccattccttattacatagagtcgctgacgggtatcaccaacagcatg
gtggccgaagcaccaccgtttgaagcagtggcgccgctgatccatgaactgctgcacgat
aaaattttcgtggcgcacaacgtcaactttgattattcgtttgtgaagcaccacctggcg
gccgccgggctggaccttcagtgtaaaaagctgtgtaccgtcaggctggggaggaagatc
ttcccgggactaccgtcctatagtcttggcaatctctgccgccatctggagataccgatc
aacggccgtcaccgcgcgggcggggatgcggaggctacgacaaagcttttctccctgttg
ttgcagcatgacaaggaaaaagctatcgccggcgcgctgaaagcgggctcgaaagaacag
ttcctgccgcccaacctgcagccggaagtggtgaagcagttgcccgaagtgccgggcgtc
tattatttccatgacctcaaaggaaaggtggtgtacgtggggaaagccaaagatctgaaa
aagcgcgtcaacagccactttacagggcatagcgccagccgtcagcggcagaatttcctg
cgtaccgtctgtaatatcacttaccaggaaaccggtacagacctgatggcctgtatcctc
gaatcggtggagatcaagcgactgtggccggcttttaatgcggcacagaagcgggtggag
ttccgttatggtttttatctttttgaagaccaggaaggatatctgcgcctcgtcatcgag
aagaagcgcaagttcagccacccggtgcatgcctttaacctgctgatagacggtcaccgg
ctcctgcgggcgttgatccggcagtttgagctgtgccccaggctctgttttctgcagaaa
ggagggggcacctgcgccggaaaaacagctgccacctgccatggcgcctgcgagaagctg
gaagcgccggaggcttataatgaacgggtaaaagcggcgatagccttcctgcaggaacaa
cagccttccgtggtgatactggacaaaggccgcaacaccggcgaacaaagttgtatcctc
atggagaaaggccggttctatggcatgggttacgtgcctgttcacctgcaaacaacggat
gccgaactattaaggccgcacctgacacagtaccccgaaaatgaaatcatcatcagttta
ttgagaccgtatgccggtgcggggcaacagttggcatcttcccaaaaatga
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