Chitinophaga oryzae: HF329_07910
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Entry
HF329_07910 CDS
T07451
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
coy
Chitinophaga oryzae
Pathway
coy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF329_07910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coy03021
]
HF329_07910
Transcription machinery [BR:
coy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HF329_07910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
HTH_40
HTH_23
HTH_20
HTH_10
RecX_HTH1
NXF_NTF2
Motif
Other DBs
NCBI-ProteinID:
QJB31228
LinkDB
All DBs
Position
1926956..1927555
Genome browser
AA seq
199 aa
AA seq
DB search
MYLNQPENNRPSKLREEANIQLLVERIASLGDEQAYKALFRLFYKPLSQFAFSIVKSWES
AEEVASDVFMNIWRNRERLLQVQNIKVYLYVSAKNISLNYLSRASRTQHFSLDELEVDIS
GGYATPEQIFISGEMVKKIEAAINQLPPKRKMIFKLIREDGLRYKEVAQILDISVNTIDV
HMAQALKKISEVVHLHFSR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctcaatcaacctgaaaataaccggccatccaaattgagggaggaagcgaatata
caattgctggtggaacgcattgcgtcgctgggcgacgaacaggcctacaaggccctgttc
cgcttgttctataaaccactcagccagtttgccttctccatcgtcaagtcatgggaatcg
gccgaagaagtagcctccgacgtattcatgaacatatggagaaaccgggaacggctgctg
caggtccagaatattaaagtctacctgtacgtctcggccaaaaacatctccctgaattac
ctctcccgcgcttccaggacccagcatttcagtctcgacgaactggaagtggatatcagc
ggcggttacgccacgccggaacagatatttatctccggggaaatggtcaaaaagatagag
gcagccatcaatcagcttccccccaaacggaaaatgatctttaaactgatccgggaggac
ggcctcaggtacaaggaagtggcgcagatactggacatttcagtgaacaccatcgatgtg
catatggcgcaggcgctgaaaaaaatcagtgaagtcgtccaccttcatttctcccgctaa
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integrated database retrieval system
