Chitinophaga oryzae: HF329_12275
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Entry
HF329_12275 CDS
T07451
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_12275
Transporters [BR:
coy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HF329_12275
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QJB32059
UniProt:
A0AAE6ZIH7
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All DBs
Position
3210454..3212094
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AA seq
546 aa
AA seq
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MKKSFKYIGALALTITLAGSCNERDFLTQTDPNRITETNFWKDESSLSMALAATYSPLRL
PLYGYWGAFTGLQDINAMGDDVFTIPGEEPGTWAIASYTNDENNGDAADIFEKTYQCIHR
ANLILARIDKVPVDAAKKDSYIAEAKFLRGISYFILAANWGGVPLRTEPVETTNAYAAPC
ASKEEVWQQVISDLTAAKDKLPVTRDPKEQGRATKGAATAFLGKAYLYMENYPQAEATLT
LLTQAPYNYGLVDNFEDNFTDQKEFNKESVFEWVCAPLGDPYGPWGAETANSPMFNYIPQ
FIGPPAGGGWLKYVPSNYLVSQFVKEQRPTGADTKFDKRMYATLMWKRSTLGEQDTTFYD
SKTFDELWSSARSKIVRLYPDTKLDTTTNGRFLIKKHTGAWRNVANADNYWGATPSTANY
RVMRFAEVLLLRAEAATRNGHTGLALADINQIRTRAGLAPKTATQLPGPDQLMAEIDHQK
LLEFFYEQNRIYDLRRWNKSAAQLASILTARQKQGANTFKAKHYVLPIPARELNANPKAT
QNDLWK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcattcaaatatatcggcgcactggcactgacgataacgctggccggcagt
tgcaatgaacgcgatttcctgacgcaaacagatcccaacaggatcaccgaaaccaatttc
tggaaagatgaaagcagcctgagtatggcgctggccgccacttacagcccgttgcgcctt
ccgctctacggctactggggcgccttcaccggccttcaggacatcaacgccatgggcgac
gatgtgtttaccatccccggcgaagaacctggtacctgggccatcgcctcatataccaac
gacgaaaacaacggcgacgctgccgatatcttcgagaaaacctatcaatgcatccaccgc
gccaacctaatactggcgcgtatcgataaagtgccggtcgacgccgccaaaaaagacagc
tatatcgcagaagccaaattcctccgtggcatctcctactttatccttgcggccaactgg
ggcggcgtgccactgcgcaccgaaccagtggaaacgaccaacgcctatgccgccccctgc
gccagcaaagaagaggtatggcagcaggtgatcagcgatctcaccgccgccaaagataaa
ctgccggtaacacgcgatcccaaagagcaaggcagggccaccaaaggtgccgccacggct
ttccttggcaaagcctacctctatatggaaaactatccgcaggcggaagccacgctgaca
ctgctcacacaagcgccttacaactacggcctcgtggataatttcgaagacaacttcacc
gatcagaaagagttcaacaaagaatccgtcttcgaatgggtatgcgctcccctcggcgat
ccgtacggcccctggggcgctgaaacagccaattcaccgatgtttaactatatcccgcag
ttcatcggtccacccgccggtggcggctggcttaaatatgtaccgtccaactacctcgtg
tcccagttcgtaaaagaacagcggcctaccggtgcggataccaaattcgacaaacgcatg
tatgccacactgatgtggaaacgctccaccctcggcgagcaagacaccaccttctacgac
agcaaaacgttcgatgaactgtggagctccgcacgttccaagatcgtgcgcctctatccg
gacacgaagctggacaccactaccaacggacgtttcctcatcaaaaaacacaccggcgcc
tggcgcaatgtggccaatgccgataactactggggcgctacgccttccaccgccaactac
cgcgtgatgcgtttcgccgaagtactgctcctgcgcgcagaagcagccacccgtaatggt
cacaccggcttggcactggcagacatcaaccagatacgtacccgcgcaggcctcgctcct
aaaaccgcaacgcaactgcccggccccgatcagctgatggcggaaatagaccaccagaag
ttgctggaattcttctacgaacaaaacaggatctacgacctgcgccgctggaacaaatcc
gccgcacaactggcctccatcctgaccgcccgccagaaacaaggcgccaacaccttcaag
gcgaaacattatgtactgcctatcccggcaagggagctgaatgccaatccaaaagccaca
cagaacgatctgtggaaataa
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