Chitinophaga oryzae: HF329_13840
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Entry
HF329_13840 CDS
T07451
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
coy03036
]
HF329_13840 (smc)
Chromosome and associated proteins [BR:
coy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HF329_13840 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
MscS_porin
Crescentin
AAA_29
DUF3130
Tropomyosin
ABC_tran
TPR_MLP1_2
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QJB32350
LinkDB
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Position
complement(3650282..3653812)
Genome browser
AA seq
1176 aa
AA seq
DB search
MRLKTLEIKGFKSFADKTVLNFDEGITGVIGPNGCGKSNIIDSIRWVIGEHKISNLRSEN
QSGLVFNGSKTRSASGMAEVSLTFENTKNVLPTEFTTVTITRKFYKNGDSEYRLNDVACR
LKDIHNLFMDTGVSTDSYAIIELGMVDDIIRDKENSRRRMLEQAAGISIYKTRKKEAKSK
LEATEGDLNRIEDLLFEINNNLKTLEGQARKAERFYEVKKEYREISIELAKAALEGFNVT
FRELSDKQQEESDRKLQLETEITTAEAAVEEDKLHFVAKERELQTLQKSFNELVATIRTK
ENDKNLAAQQLTYLREREKNINDFLNNAEGQLQGLTTSIEFTEKQVVEEAEVFESMEDEL
ETLREMVEEKKERFQQKKLALETLRNDQQRWQRQQFEAEKKVAVADTSVQNLQRGIQQLQ
EEKNSRLQQITQLEAEKETLQHTIATSKAELDEMVRFQEETKGKILATQSDIEGLRDQLV
DENRKLDSKKNEFDLLKSLVDSLEGYPESIKFLKKNPEWNNEAPILSDIFFCKEEYRTCV
ENLLEPYLNYYVVNNVAEAVQAIRLLDTHKKGKANFFILDQFRIPANGLLAPAGTIPALD
VVEIDEKYKGLGYQLLGKVFIGEDITRLEFSQVSDDEICLVEKSGRMHRGKFNITGGSVG
LFEGKKLGRAKNLEKLEAEIKELEATVGALRTQIQDKHNQVLGYNSQLNENNINTAREKI
NQLNNQLFGLQNRIENFHHLIEGGDKRLEEMQQSLTTNQESISGVREELENLNDRVGELQ
DAITEADRTAQEVEQQFNMANVQFNNQNLQHTRQHSKVQALKQELEFKRKQLTDLHAQIT
SNKTQLEDAVANIAAAEEKRGAAEEGLVELFRQREEEEKALNEKDQEYYNFRNHLQELET
TLRTKQRAREQLEQQLNVIKDKVNELKLQLASMKERLSVEFKVNLDEIIDEQRTSELPLD
ELQGSAERLKKRLENMGEINPTAIEAYQEMKKRYEFILEQKTDLVNAKDSLLATIQEVET
TANQKFLDTFNTVKENFIRVFKALFTEEDQCDMILSDPENLADTGIEIIAKPKGKRPAAI
TQLSGGEKTLTATALLFAIYLIKPAPFCILDEVDAPLDDANVGKFTNMIRKFSDNSQFII
VTHNKQTMAAVDVIYGVTMQEPGVSKLVPVDFRSLN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttaaaaacactagaaattaaaggctttaaaagttttgccgataaaaccgtgctg
aacttcgatgaagggatcaccggtgtcattggacccaacggttgcggcaaaagtaatatc
atcgactccatccgctgggtgatcggggaacacaaaatcagcaacctgcgttcggagaac
cagtcagggctggtgttcaacggttccaaaacacgctccgccagtggtatggcagaggtg
agccttacctttgaaaataccaagaacgtacttcccaccgaatttactacggttaccatt
acccgcaagttctacaagaacggcgacagcgagtaccggctcaacgatgtggcctgccgc
ctcaaggatatccataacctcttcatggacaccggcgtcagcaccgattcctacgccatc
atcgagctgggcatggtggacgatatcatcagggacaaggaaaacagccgtcgccgcatg
ctggaacaggcggcaggcatctccatctataaaacccgtaaaaaagaagccaaatccaaa
ctggaggccacggagggggacctgaaccgtatcgaggacctgttgtttgaaatcaacaat
aacctgaaaacgctggaaggccaggcccgtaaagcggaacgcttctacgaggtaaaaaag
gaataccgcgaaatcagcattgaactggcgaaagccgccctggaaggatttaacgtcacc
ttcagggaactgtctgacaaacaacaggaagaaagcgaccgtaaactgcaactggaaacg
gaaattaccactgcagaggccgctgtggaagaagataaactgcatttcgtcgccaaggaa
agggaactgcaaaccctccagaagtcgttcaacgaactggtggcgaccatccgtaccaaa
gaaaatgacaagaatctcgccgcccagcagctgacctatctgcgggaaagagaaaaaaat
atcaatgacttcctgaacaatgcggaaggacaattacagggactgaccacctccattgag
tttaccgagaaacaggtagtggaggaagcggaagtctttgaatccatggaagatgaactg
gaaaccctccgcgaaatggtggaggagaaaaaagaacgcttccagcaaaagaaactggcc
ctcgaaaccctgcgtaacgaccagcagcgctggcagcgacagcagtttgaggccgaaaag
aaagtggcggtagcggatacctccgtgcagaacctgcaacggggcattcagcagctgcag
gaagagaagaacagccgcctgcaacagatcacccagctggaagcggagaaagaaacgctg
caacacaccatcgccaccagcaaagcagagctggacgagatggtccgtttccaggaagag
acgaaaggcaagatcctggctacccagtcggatatcgaagggctgagagatcagctggtg
gatgaaaaccgtaagctggattccaaaaagaatgaatttgacctgcttaagtcgttggta
gacagtctcgaaggttatcccgagagtatcaagttcctgaaaaagaacccggaatggaac
aacgaagcgcccattctgagcgatatcttcttctgtaaggaggaataccgtacctgcgtg
gaaaacctgctggaaccttatctcaactactatgttgtcaataacgtggcagaagcggta
caggccatccggttgctcgacacccataaaaaaggcaaagccaatttttttatcctcgat
cagttccgcataccggccaacgggctgctggcgccggcaggcaccattccggccctcgac
gtggtggaaattgacgagaaatacaaagggctcggttatcagttgctgggcaaagtattc
atcggggaagacatcacccgccttgaattcagccaggtatccgacgatgaaatatgcctg
gtagagaaatccggccgtatgcaccggggtaagttcaatatcaccggcggctccgtggga
ttgtttgaaggtaaaaaactgggccgggccaaaaacctggaaaagctggaggcggagatc
aaagaactggaagccactgtaggcgcgctgcgtacccagatacaggacaaacacaaccag
gtgctgggctataacagccagctcaatgaaaataatatcaataccgcccgggaaaagatc
aaccagctgaacaaccagctgtttgggctccagaacaggatcgagaacttccatcacctg
atagaaggcggcgacaaacggctggaagagatgcagcagtcgctcacgaccaaccaggag
agtatttccggcgtccgtgaagaactggaaaacctcaacgaccgggtaggggaactgcag
gacgccatcaccgaggccgacaggaccgcccaggaagtggaacagcagttcaatatggcc
aatgtgcagttcaataaccagaacctgcaacatacccgtcagcacagtaaggtgcaggcg
cttaaacaggagctggaattcaaacgcaaacagctgacagacctgcacgcccagatcacc
agcaataaaactcagctggaagacgcagtggccaacattgcggcggcagaagaaaaacgc
ggcgccgcagaagagggattggtggagttgttccgccagcgtgaagaagaggaaaaagcg
ctcaacgaaaaagaccaggaatactataatttccgtaaccatctccaggaactggaaaca
acgctgcgtaccaaacagcgcgcccgcgagcagctggaacagcagctcaatgtgatcaag
gacaaagtgaatgagctgaagctgcaactggcttccatgaaagaacgcctgagcgtggag
tttaaagtcaacctggacgaaatcatcgacgagcagcgcacttccgagttgccgctggac
gagttgcagggaagcgccgagcgcctcaaaaaacgccttgaaaacatgggggagatcaac
cctacagcgatcgaggcgtaccaggaaatgaaaaaacgatacgagtttatcctggaacag
aaaaccgatctggtaaacgcaaaagattccctgctggccaccatccaggaggtggaaacg
acggccaaccagaagttcctcgatactttcaatactgttaaagaaaactttatccgcgta
tttaaagccctctttaccgaggaagaccagtgtgacatgatcctgagcgatccggagaac
ctggccgataccggcatagaaatcattgctaaacccaaaggcaaacgtccggcagccatt
acccagctttccggtggagaaaaaacccttacggccaccgccctgctgtttgccatctac
cttatcaaacccgcgccattctgtatcctggatgaggtagacgcgccgctcgatgatgcc
aatgtgggcaagttcaccaacatgatcagaaaattctctgataattcccagtttattatt
gtaacacataataaacagaccatggctgctgttgacgtgatttacggggttaccatgcag
gaacccggcgtgagcaaactggtcccggtggacttcagaagtttaaactga
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