Chitinophaga oryzae: HF329_15760
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Entry
HF329_15760 CDS
T07451
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
coy
Chitinophaga oryzae
Pathway
coy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HF329_15760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_15760
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HF329_15760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QJB32695
UniProt:
A0AAE6ZGS8
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Position
complement(4142817..4144937)
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AA seq
706 aa
AA seq
DB search
MKYFPESALVQLEFDKIQALLQDHCKTELGTQMAIDLRLHTHIDYVKAALQQAHEYKQLI
LLQEHFPNDHVLNLHTELRLLSIQGAVLTGDQAMSIRKLAESMHSIVRFFDHDRRIQYAG
LYDVIKDTYYEKKITALIDEVLDETGQVRDNASPELAKIRISLFRKRTELRRVFERILQK
LQKLNYLADQEEAFLNGRRVVAIYAENKRMIKGIIHGESDTRKTAFLEPEETIELNNDIQ
SLEREEGREVYRILKALTGSLSGYNELLNGYHQILGTYDFIRAKAKLALDMDGNYPSLVP
HAQLHLIQAYHPLLLLYNRKNSKPTVPVSLSLDKDAHILVISGPNAGGKTVTLKTIGLIQ
LMLQSGLLVPVHPSSQLGIFKQLMIHIGDTQSLEFELSTYSSHLKNMKYFMETANGRTLF
FIDELGSGSDPNLGGAFAEVIMEELAKKHAFGVVTTHYLNLKVMANKVKGIINGAMGFNE
ETLMPMYKLMIGKPGSSYTFSIAERIGLNPALIARAKKLVDEGHFQLDKLLNKAEQDLQK
VESKEKELQKLVKENEKLKREYEILSDKEKKHQQITFLKLQNQIKENDLAYLKDMERKLK
QIVVEWKRASDSNDREKVMKQAEILLFRRREKQINEKHNKKVQDKFEEVGREVKVGDQVK
ILTNRQVGRLIEIREKRGIVQLGNIPINVKLSDLVVVREKPAEPVD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatattttcctgagtctgcgttggtgcagttggaattcgataaaatacaagcattg
ctccaggaccactgtaaaacggaactgggcacgcaaatggctattgatctccgtttgcat
acgcatatagactacgtaaaagccgctttgcaacaggcgcatgaatataaacagctgatc
ctgttgcaggagcattttcccaatgatcacgtcctgaacctgcataccgaattacggttg
ctgtctatccagggtgctgtgctgaccggcgatcaggcgatgtccatccgcaaactggcg
gaaagcatgcatagcattgtccggttttttgaccacgaccgccgtattcagtacgccggc
ctgtatgatgtgatcaaggacacttattatgagaaaaagatcacagcgcttattgatgaa
gtgctggacgaaaccggtcaggtacgcgacaacgcttctccggaactggctaagatccgt
atctccctgttccgcaagaggacagaactgcgccgcgtatttgagcgcatcctgcagaag
ttgcagaagctgaattacctggccgaccaggaagaggctttcctcaacggcagaagggtg
gtggctatctacgccgaaaacaaacgcatgatcaaggggatcatccatggggagtccgat
acccgtaaaaccgctttcctggagccggaagaaacgatcgaactgaataacgatatccag
tcgctcgaaagagaagaggggcgggaagtgtaccgtattctgaaggcgctgaccggttcc
ctgagcggttataacgaactgctcaacggttatcaccagatactaggcacttacgacttt
atccgtgcaaaggcaaagctggcgctggacatggacggcaattacccgtcgctggtacct
cacgcgcagctgcacctgatacaggcttaccatccgctgttattgttatataaccgcaaa
aacagcaagcctacggtgccggtgagcctcagtctcgataaagacgcgcacatactggtg
atcagcggtcccaatgccggcggtaaaacggtgacgctcaagaccatcggcctgatacag
ctgatgctgcagtccggcctgctggtaccggtgcatccgtcgtcccagctgggcatattc
aaacagctgatgatccatatcggtgacacccagtcgctggaatttgagctgagcacctat
agctctcacctaaagaacatgaagtatttcatggagactgccaacggcaggaccctgttc
ttcatcgacgagctgggtagcggttcagaccctaacctgggcggcgccttcgcggaggtg
atcatggaggaactggccaagaaacacgcttttggcgtggtgaccacccactacctcaac
ctgaaagtgatggccaacaaagtaaagggcatcatcaacggggcgatgggcttcaatgaa
gagaccctgatgccgatgtataaactgatgatcggtaaacccggcagctcttataccttc
tctattgcagaaaggatcggcctgaacccggcactcattgcccgggccaaaaagctggtc
gacgaggggcatttccagctggataaactgctgaacaaagcagagcaggaccttcagaaa
gtagaaagcaaagagaaagaactgcaaaagctggtcaaagaaaacgagaagctgaagcgc
gaatacgaaatcctgtccgataaggagaagaaacatcagcagatcaccttcctgaaactg
caaaaccagatcaaggaaaacgatctcgcctatctgaaggacatggaacgtaagctgaag
cagatagtggtggaatggaaacgtgccagcgacagcaatgacagagagaaagtgatgaaa
caggcagagatcctgctgttccgtcgcagggaaaaacagatcaacgaaaagcacaacaaa
aaagtgcaggacaaattcgaggaggtaggccgcgaggtaaaggtaggtgaccaggtgaag
atcctgaccaaccgccaggtgggccgcctgatagaaatccgggagaagcgcggtatcgta
cagctgggtaatattccgatcaacgtaaagttgagcgacctggtggtagtacgggagaag
ccggcagaacccgttgactga
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