Chitinophaga oryzae: HF329_16230
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Entry
HF329_16230 CDS
T07451
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
coy
Chitinophaga oryzae
Pathway
coy02024
Quorum sensing
coy03060
Protein export
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HF329_16230 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_16230 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF329_16230 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
coy02044
]
HF329_16230 (secDF)
Secretion system [BR:
coy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HF329_16230 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
ACR_tran
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QJB32783
UniProt:
A0AAE6ZGU4
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All DBs
Position
complement(4258455..4261637)
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AA seq
1060 aa
AA seq
DB search
MQLKGLVRFFAIALILISLYQLSFTFLVRNYEKKIERQAETDVAKQFPTPEQKYPGSKEL
QAFYSDTLKGFTKQRRQEIVDSTSNKQIAGFPWYVTYTKAKEKELNLGLDLVGGMNVVLE
VSVEDVIRALAGQSKDPAFNKALELAEQRKNANQTDFVTLFGQTYAEVAPQGRLATIFAN
AYQKDINFNSSNQQVLDMIRKESHAAIKNTYIVLQKRIDKFGVAQPNISLDENKGLISVE
LAGVDNAERVRKYLQATANLEFREVYKNSPEFFQNVLNPMNEAIRNAQGGNTAKPAAATD
STQAAAAAADTKTNPADTSKEGKLSDYLAKKDTGKSVKDSAKATQEQLFAEQRKQNPLFA
IMIPMFDQQSGTLIPSPSVGRILPKDTATFRQFLRMPAVQAILPKDAVFAFGPENKEDKH
GPLPLYVLKVNPANPAPRVGGERIVDARQDVGPDNQPEISMAMDNVGAHEWKKLTGELAP
ANPKDPSTLNFVAIVLDNIVYSAPSIQGEIAGGRSSISGSFTMEEANDLANILKSGKMPA
PARIVQEQIVGPTLGAESIAAGAKSFMISFVIIFVLMLVYYNSAGWVANIALVLNLLFTF
GILASLGATLTMAGIAGLVLTIGMAVDTNVIIFERIKDELTHGKSYPDAISLGYKRSYAP
VLDGHVTSLLTAFILFYFGLGPVLGFATTQIIGLLLSLFCGILVSRMITDWWTNKKRHFE
YFTPISRKVFKHAAFDFVGKRKYAYIISAIVAIGGITSFFHGFDHGIDFSGGRNFTVRFE
KTMNRQEVADKLKKEFDSEVFVKTIGNTNQLSITTAYKIEQQSLAVDQEVITKLYNGLKP
YYEASVTPEVFNTRYVIGSQTVSPTISDDLRAGAVKATVLSILVIFVYILIRFSKWQYSI
GTIFSLLHDVLLTLAVFSWFKDIVPFTLEIDQHFIAAILTVIGFSMNDTVIVFDRIREYF
KTGAHGRDRDTVINKAINDTLSRTIMTSLTVFLTILVLFIFGGEVTRGFAFAMLIGVITG
TYSSIFVAAPVLVDFDKKNQLSNESDAVAVAEKKATPAAK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaaaggactggtaagattttttgccatcgcactgatccttatctctttgtat
caactgtccttcacgtttttggtgcggaactatgagaagaagatagagcggcaggctgag
accgatgtagccaaacaattccctacacctgagcagaaataccctggcagcaaagaactg
caggctttctattctgacacgctgaaaggattcaccaaacaaagaagacaagagatcgtg
gacagcaccagcaataaacagattgcagggtttccatggtacgttacctacaccaaggcc
aaagaaaaagaactgaacctcggccttgacctggtaggtggtatgaacgtagtactggag
gtaagcgtggaagacgttatccgcgccctcgccggtcaatccaaggaccccgctttcaac
aaagcgctggaactggctgaacaacgcaaaaatgccaatcagactgatttcgttactttg
ttcgggcaaacgtacgctgaagtggctccccagggccgtctggcaactatcttcgccaac
gcgtaccagaaagacatcaacttcaactcctccaaccagcaggtgctggacatgatccgc
aaggagtcgcacgctgccatcaaaaacacctatatcgtactgcagaaacgtatcgataaa
ttcggtgtggcccagcctaacatcagcctcgatgaaaataaaggcctgatctccgtggaa
ctggccggtgtggacaacgccgagcgcgtacgcaaatacctgcaggctaccgccaacctg
gaattccgggaagtgtacaaaaacagccccgagttcttccagaatgtgctgaacccaatg
aacgaagctatcaggaacgcacagggcggcaacactgccaaacccgctgctgccactgac
agcacacaggccgctgctgccgctgctgataccaaaacaaaccctgctgacaccagcaag
gaaggtaaactgagcgactacctggctaaaaaggataccggaaaaagcgtgaaagacagc
gctaaagccactcaggaacaacttttcgccgaacaacgcaaacaaaacccgctgttcgcg
atcatgatcccgatgttcgaccagcagtccggtaccctgatccccagcccgtccgtcggc
cgtatcctgcctaaagacactgccactttccgccagttcctgcgcatgccggctgtacag
gccatcctgcctaaagacgcggtattcgcattcggtcctgaaaataaagaagacaaacac
ggcccgctgcccctctacgtgctgaaagtaaatcctgctaaccctgcaccccgtgtaggt
ggcgaaaggatcgtcgacgcccgccaggacgttggtcccgataaccagccggaaatcagc
atggcgatggacaacgtaggtgcgcacgagtggaaaaaactgaccggtgaactggcgcct
gccaacccgaaagatccttccaccctcaacttcgtggctatcgtactcgataatatcgtt
tactctgctccttccatccagggcgaaatcgccggcggccgctcttctatcagcggtagc
tttaccatggaagaagccaatgacctcgccaatatcctgaagtccggtaaaatgcctgct
cctgcacgcatcgtacaggaacagatcgtaggacccaccctcggcgccgaatctatcgct
gccggtgcaaaatccttcatgatctccttcgtgatcatcttcgtactgatgctggtatac
tataacagcgccggctgggtagccaacatcgcactggtgctcaacctgctgtttaccttc
ggtatcctcgcctccctcggtgccacactcaccatggctggtatcgccggcctggtactg
accatcggtatggcggtagacaccaacgtgatcatcttcgagaggatcaaggatgagctg
acacacggcaaatcctaccccgacgcgatctccctcggttacaaacgctcttacgcgcct
gtactcgacggtcacgttacctccctgctcacagcgttcatcctgttttactttggtctg
ggcccggtactcggtttcgctaccacccaaatcatcggtctgctcctgtccctgttctgc
ggtatcctcgtatcccgcatgatcaccgactggtggaccaacaagaaaagacacttcgag
tactttacgccgatttcccggaaagtcttcaaacacgctgccttcgacttcgtaggcaaa
cgtaaatatgcttacatcatctctgccatcgtggcaataggtggtatcacctccttcttc
catggcttcgaccacggtatcgacttctccggtggccgtaacttcactgtccgcttcgag
aaaaccatgaacagacaggaagtggctgacaagctgaagaaagaattcgatagcgaagta
ttcgtaaaaaccatcggcaacaccaaccagctgagcatcactactgcctataaaattgag
cagcagagcctcgcggttgaccaggaagtgatcaccaaactgtacaatggcctcaaacct
tactacgaagccagcgttacaccggaagtgttcaacacccgttatgtgatcggttcccag
acagtatcgcctaccatctccgacgaccttcgcgccggcgcggtaaaagcaaccgtactg
tctatcctcgtgatcttcgtgtatatcctgatccgtttcagcaaatggcagtactctatc
ggtactatcttctccctgctgcacgacgtattgctcactctggcggtattctcctggttt
aaggacatcgttcctttcaccctggaaattgaccagcacttcatcgctgcgatcctcacc
gtgatcggtttctccatgaacgataccgtgatcgtgttcgaccgtatccgtgaatacttt
aaaacaggcgcacatggcagagacagggacaccgtgatcaacaaagcgatcaacgatacc
ctgagccgtaccattatgacgtccctcactgtattcctgaccatcctggtactgttcatc
ttcggtggtgaagtaacccgcggtttcgccttcgctatgctgatcggcgttatcaccggt
acctactcctccatcttcgtggccgcgccggtactggttgactttgacaagaaaaaccag
ctgtccaacgaaagcgacgcggtagctgttgctgaaaagaaagctactcccgctgctaaa
taa
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