Chitinophaga oryzae: HF329_19425
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Entry
HF329_19425 CDS
T07451
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K02014
iron complex outermembrane recepter protein
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_19425
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_19425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Big_1
TTR_TEN1-4
DUF3512
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
QJB33368
UniProt:
A0AAE6ZJL4
LinkDB
All DBs
Position
complement(5098453..5101704)
Genome browser
AA seq
1083 aa
AA seq
DB search
MRRSFLLTTLLFLCCCFAAWAQDKKAVTGTVKDEKGTPLPGVTVKEKGTANGAMSGADGT
FKVQVASDATLVLSYIGFMNQEVPVNGQTTLTIVLKEDNKNLNEVVVTAMGMKREQRKLG
YAVTELKGADVAKTNSINPVSALQGKVAGLDISAAAGGPAAAPRIVLRGAKSLNGKDQPI
FIVDGVIFENDESAADVNFGNVLKNLNPDDYESVTVLKGAAATALYGSRAINGAILITTK
KGNARKGIGVTVSQTAQIEKVYRGAIDLQNGYGQGIDGTYDNTAGGYSFGPKMDGRMVQL
PNGTSVPFTPKPNNAKDLYQTGKYFNTNVAMEGGNDKGTFRLSYSHLDNNSVSPNNSFGR
NTFAFRGSSQISRVLSADAGVTYATSKTLNPDRQGGDYTNYNIGRKWVYVFPRNYDPSIW
SKPENYLGPNGGRANLSTNPGADYFYQQAYNSWTRKESLITGNFSLTAEATSWLKFVGKA
NFSSEQSTDERKEVGTAAFFKGSDGFYSVAGVNKSQYTFTGMAIITPKLGKKFDGNLNLG
AETWNSGIGKQYNNYSQGGLRIPFLYDISNSVGAPIVKNDPLLRKRINSVFFAASLAYNN
ELFLDVTGRNDWSSALTYPKGSKGTTTNSYFYPSVSAAWEFTQTLKEEMPSWISYGKLRA
SYAMVGGDLDPYQINTGYYTTGLFQGSSTGENLPLVNIFNSDILPNMALKPSISKSWELG
ANVRFFNNRLGFDFAWYRTNITNQIINLPTPIESGVTSRYINAGSMINRGIELSINGTPI
QNKNFTWDVTLNGSRNKNKIVSLTPGVDQLQLNEDQGVKAIASVGGSYGNLVTDYGYTRD
ANGKPIITLGGSDFPYKFVRGNAVVGNIMPDFNLGLQNNFTYKNWSLGVLIQARIGGDFF
SASHQYGTGRGTTANTMYGRDSEHGGITFTDGSGVTRNDGMIPDAVFQKGTTISKDGQNI
VLDGMTYQQAYEKGYVSPLTPFQYYGMIGDWGIGIREASVFDASYVALREVSLGYSLPTD
LVQRWRLNSLRVSLVGRNLGYLFNNLPDHINPEAVRNNKTSAFSEYGAVPFVRNMGLTVQ
VGF
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagatcatttcttctcaccacgttgcttttcttatgctgctgctttgctgcatgg
gcgcaggataaaaaagctgttacgggaaccgtaaaagatgaaaaaggaacgcctttgccg
ggtgtaacggtaaaggaaaaaggaaccgccaacggcgccatgtcgggtgctgatggtacc
tttaaagtacaggtggcttccgatgctacactggtcctctcttacatcggttttatgaat
caggaggtgccggtaaacgggcaaaccaccctgaccatcgtcttgaaagaagacaacaaa
aatctgaacgaagtagtggttaccgccatgggtatgaaacgtgaacaacgtaaactcggc
tatgcggtaacagaattgaaaggtgcggacgtggccaaaaccaactccatcaacccggtg
tctgccctgcagggtaaagtggccggccttgatatctccgctgctgccggtggccctgcc
gcagctccccgtatcgtgctgcgcggcgccaaatcactgaacggtaaagatcagccgatc
ttcatcgtggatggtgtgatcttcgaaaacgatgaaagtgctgccgacgtaaacttcggt
aacgtactgaaaaatctcaacccggacgattacgagtcagtaactgtgctgaaaggcgct
gctgctaccgctctttatggttcccgcgctattaacggcgccatcctcattaccaccaaa
aaaggtaatgcaagaaaaggaataggcgttaccgttagccagaccgcccagatcgaaaaa
gtataccgtggcgctatcgacctgcaaaatggttacggccagggtatcgacggtacctac
gacaacactgccggcggttacagcttcggtcctaaaatggacggcagaatggtgcagctg
cccaacggcacaagcgtaccctttacgcctaaacccaacaacgccaaagatctttaccaa
accggtaaatactttaacaccaacgtggccatggaaggcggtaacgacaaaggaactttc
cgcttgtcttactcccacctggacaacaactccgtttctccgaacaacagcttcggcaga
aacacttttgctttccgcggttcttcccagatctccagagtgctgagcgcagacgcgggc
gtaacctatgctacttccaaaacactgaaccccgaccgtcagggtggtgactacaccaac
tacaacatcggccgtaaatgggtatatgtgtttccgcgtaactacgatccttctatctgg
agcaaaccggaaaactacctcgggcccaacggtggccgtgccaacctgagcaccaacccg
ggcgctgactatttctatcagcaggcttacaacagctggacccgtaaagagtccctgatc
accggtaacttctccctcaccgcagaagctacaagctggctgaaattcgttggtaaagcc
aacttcagcagcgaacagtctaccgatgaacgtaaagaagttggtactgccgccttcttt
aaaggttcggatggtttctactctgtagcaggcgtgaacaagtcccagtacaccttcacc
ggtatggcgatcatcacaccgaaactcggtaagaaattcgacggtaacctgaacctgggt
gctgaaacatggaacagcggtatcggtaaacaatacaacaactactcccagggtggtctc
cgtatccccttcctgtatgacatctccaatagcgtgggcgcaccaattgtaaagaatgat
ccgctgctccgcaaacgtatcaactccgtatttttcgcggctagcctcgcgtataataac
gaattgttcctggacgtgaccggccgtaacgactggtcttctgccctgacttatcctaaa
ggcagcaaaggaactaccaccaactcttatttctatccttccgtaagtgctgcgtgggaa
ttcacccagacactgaaagaagaaatgccttcctggatcagctacggtaaactgcgcgcc
tcttatgcgatggtgggtggtgacctcgatccttatcagatcaacaccggctattatacc
accggtctgttccagggctcttctaccggcgagaacctgccgctggtaaacatcttcaac
tcagacatcctgccgaatatggccctgaaaccttccatctccaaaagctgggagctgggt
gccaatgttcgcttcttcaacaaccgtctgggctttgacttcgcctggtaccgcaccaat
atcaccaaccagatcatcaatctgccgacgccgattgaatccggtgttacttcccgttac
atcaacgcgggtagcatgatcaacagaggtatcgaactgtctatcaacggtacgcctatc
cagaataaaaactttacctgggacgtaacgctgaacggcagccgcaataaaaacaaaatc
gtaagcctcacaccgggtgttgaccagctgcagctgaacgaagaccagggcgtaaaagcc
attgcttctgtaggcggtagctacggtaacctggtcactgactacggttatacccgcgac
gccaacggcaaaccgatcatcaccctcggcggcagcgacttcccctacaaatttgtacgc
ggtaacgcagtagtaggtaacatcatgcctgacttcaacctgggcctgcagaataacttc
acctacaaaaactggagcctcggcgtattgatccaggcacgtatcggtggtgacttcttc
tctgcttcccatcagtatggtaccggtcgtggtactactgccaacaccatgtatggtcgt
gattccgaacacggcggtatcacctttaccgatggttccggcgttacccgcaatgacggt
atgatccccgatgcggtgttccagaaaggtaccaccatctccaaagatggccagaatatc
gtgctggatggtatgacttaccagcaggcgtatgaaaaaggttacgtatccccgctgaca
cccttccaatattatggtatgattggcgactggggtatcggtatccgcgaggcttccgta
ttcgatgcttcttatgtagcgctgcgtgaagtatctctcggctactccctgcctacagac
ctggtacaacgctggagactgaacagcctgcgtgtatcgctcgtaggccgtaacctgggt
tacctgttcaacaatctgccggaccacatcaacccggaagcagtacgtaacaacaaaaca
tctgccttctctgagtatggcgctgtaccgtttgtacgtaacatgggcctgactgtacag
gtaggattctaa
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