Chitinophaga oryzae: HF329_20085
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Entry
HF329_20085 CDS
T07451
Name
(GenBank) gliding motility-associated C-terminal domain-containing protein
Organism
coy
Chitinophaga oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
CHU_C
PKD
DUF5074
Ig_7
SBBP
Tet_res_leader
Motif
Other DBs
NCBI-ProteinID:
QJB33491
UniProt:
A0AAE6ZI89
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All DBs
Position
5274627..5277839
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AA seq
1070 aa
AA seq
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MKVPPLRCLPLFTLLLLLCCRSYSQDKLYVVNGYELGYVNMGDYSYKKLATIPATFTDLA
ITPDGKFYAVYGGSLYEVNPATGSSSTVTVTPSFGVGNSLVSDRNGDLYVAGNGNMLYRI
NMKTRTTSFIGNMIASPGGDLCFSDGKLYMVTSGNTLVEITLSADRNRIISQRLVGPLNV
RGSVFSIGTNQYGICYLISTAKELALIDLEDATTYVISNSIKGSMRDVWGIAMEGEGGND
KDIEVCGNGIDDDHNGRTDGEDMACRLRRGTCDSDSREIFREDFGTGTGFGAPLPGLGNG
AYQFSTTAPLQDGYYTVVSNPQLAQGAPTWKQMTDHSGKPGGRMMVINGSFLPGEFYRKK
ITGLCGGLQYALSVSACSVISPLVSCGANTTPVPSRIRFRIEDENGHILGQLSERYIAAD
PDPKGKWKEYGMIFTLPENVQNIQIVLLNDAPGGCGNDLAVDDILLSTCKPVLPVKINGN
NSPAATCTGGTVSFTADRTGISLSNPVFAWQKLDETDGQWKDIPNARGEVFILSSFKATD
AGQYRVQLKEGSAAPCAKEAVSAAAVLRLKDPPVVTAAGAIKVCNGEPLKMQASTAATPS
TVTWQGPDGNSYNGLNAQITGSATTQHTGDYVLTAEFSDGCTTTAKTQVTVQERSRFDFT
VPDAAVCVGLPVKVQASGAGVINAYQWSAANGTIAGNNTPAPEITFNTGGKQTVTLKVTG
DCISKEPVSHEVSILEEKNIGFTLAPEVCMGTPVQVRADNSVQADTYSWTTGNGAITGGT
TASPEITWHQAGIQTVTLKSTGYCIAAQPVSHTINVLAATDPGEITFNDGVCPGEPLEVE
VKNYTGSAIRWQIAGQPDIQGTQNKLAVTWNRSGAYPVKYAIDGACGVVEVTAPQPAIVR
ALPTVALGRDTLICRGIQFMLRPRYSTDAIAFSWQDGPFTAAAGLPVSTSGNYKVTVKNE
WGCKASDDIRITEKYCGCDVYLPTAFSPNGDGKNDVFRPVVYCVTKRFLFQVYNRWGQLI
FSTTNPREGWNGVLPGGGVAATAGYLWTIEYESFEFPDVIRKTGTVTVIK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttccaccattgcgttgcttacccctgttcacactgctgctgttactctgttgc
cgcagttattcacaggacaaactatatgtagttaatggctatgaactgggttatgtgaat
atgggagactactcctataagaagctggccaccataccggcaacattcaccgatcttgct
attacgcccgacggaaaattttacgcagtatacgggggatcgctctacgaagtaaaccct
gccaccggcagcagcagcactgtgaccgtcactccttcctttggcgttggcaattccctc
gtcagcgacagaaacggagacctgtacgtagcaggcaacggcaacatgctgtatagaatc
aacatgaaaacccgcactacctcttttataggaaatatgatcgcttcccccggcggtgat
ctgtgtttcagtgacggtaaactgtacatggtcacgagtggcaatacgctggtagagatc
accctgtcggccgacaggaacaggatcatttcccaacggctggtaggaccgctgaacgtg
cggggcagcgtatttagtatcggtacgaaccaatacggcatttgttacctgatcagtacc
gcaaaagagctggcgctgatagacctggaagatgctaccacctacgtgatcagtaattcg
ataaaaggcagcatgcgggatgtatggggcattgccatggaaggagaaggcggaaacgac
aaagacattgaagtatgcggcaacggtattgatgatgatcataacggccggaccgatgga
gaagacatggcatgccggctgaggcgcggcacctgcgattccgacagcagggagatcttc
cgcgaagatttcggaacagggacggggttcggcgcacctttacccggcctgggcaatggc
gcttaccagttctccactaccgctccgctgcaggacggctattataccgtggtcagcaac
ccgcagctggcacagggagctccaacctggaagcagatgactgaccacagcggcaaaccc
ggtggccgtatgatggttatcaacggctcttttctcccgggagaattttaccggaagaaa
attaccggcctttgcggcggactgcaatatgcgctctccgtcagcgcctgctccgttatt
tccccgctcgtgtcatgcggcgccaacaccacgccggttccttcccgtatccggtttcgc
atagaggatgaaaacggtcatattctcggacaactctcagaaaggtatatcgcggcagac
cctgaccctaaaggcaaatggaaagaatatggaatgatcttcaccctgccggagaatgta
caaaacatacagatagtgctgctgaacgacgctcccggcgggtgcggtaatgacctcgct
gtggacgacatcctgctaagcacctgtaaaccggtactcccggtgaaaatcaacggcaat
aacagtcctgctgccacctgcaccggcggcacggtgtcctttacagccgaccgcaccggc
atctccctaagcaacccggtgtttgcctggcagaaactggacgaaacagacggacaatgg
aaagatatccccaatgcccggggagaggtatttatactgagcagtttcaaggctaccgat
gccgggcaatacagggtgcagcttaaagaagggagtgccgccccctgtgctaaagaagcc
gtttccgcggcagccgtgctccggctgaaagaccctccggtggtgacggcagccggcgct
atcaaagtatgcaacggcgaacccctgaaaatgcaggcttcaactgcggccaccccttca
acggtcacctggcagggacccgatggcaacagctacaacgggctgaacgcacagatcacg
ggtagcgccaccacacaacatacgggcgactatgtgctcaccgctgagttttcagatggt
tgcaccaccaccgcaaaaacgcaggttaccgtgcaggaaagaagccgcttcgatttcacc
gtaccggatgcggcggtatgtgttggcctgccggtaaaagtacaggcttccggcgccggc
gttatcaacgcttatcagtggagcgccgccaatggcactatcgccggcaataatacccct
gcgcccgaaatcacctttaataccggtggcaaacagaccgtaaccctgaaagtcaccggt
gactgcatatcgaaagaacccgttagccatgaagtgtccatcctggaagaaaaaaacatt
ggttttaccctcgcccccgaggtatgtatgggcacccccgtacaagtcagggccgacaac
agcgtacaggcagatacctacagctggaccacaggcaacggcgccattaccggcggcacc
accgcttctcccgaaatcacctggcaccaggcgggtatacaaacagttaccctgaagagc
acaggctactgtatcgcagcacaacccgtcagtcataccatcaacgtccttgctgccaca
gacccgggagagatcaccttcaacgatggcgtatgcccgggtgaaccgctggaggtcgaa
gtaaaaaattacacaggcagcgctatccggtggcagatcgcaggacaacccgacatacag
ggcacacaaaataaactggccgtcacctggaacaggtcaggcgcgtaccccgtgaaatac
gccatcgacggcgcttgtggcgtagtggaagttacagccccccaaccagccatcgtgagg
gcgttaccgactgtagcactgggcagggacaccctcatctgccgtgggatacagttcatg
ctccggccccgttacagtaccgacgccatagcctttagctggcaggacggtcccttcacc
gcggcagcggggctgccggtgagcacatcaggcaattataaagtcaccgtgaaaaatgaa
tggggttgtaaagcctccgacgatatccgcatcaccgaaaaatactgtggctgcgacgtg
tacctgcctaccgctttctctcccaatggagacgggaagaatgacgttttcaggccggtg
gtctactgcgtcaccaaaaggttcctcttccaggtgtataacagatggggacaactgatc
tttagcaccaccaatccccgtgaaggctggaacggcgtgctgccgggaggtggcgtcgca
gcgacagccggttacctgtggaccatcgaatacgaaagcttcgaattcccggacgtcatc
cgaaaaacgggaacggtgaccgttattaaataa
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