Chitinophaga oryzae: HF329_21135
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Entry
HF329_21135 CDS
T07451
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
coy
Chitinophaga oryzae
Pathway
coy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF329_21135 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coy03019
]
HF329_21135 (groL)
03110 Chaperones and folding catalysts [BR:
coy03110
]
HF329_21135 (groL)
03029 Mitochondrial biogenesis [BR:
coy03029
]
HF329_21135 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
coy04147
]
HF329_21135 (groL)
Enzymes [BR:
coy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HF329_21135 (groL)
Messenger RNA biogenesis [BR:
coy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HF329_21135 (groL)
Chaperones and folding catalysts [BR:
coy03110
]
Heat shock proteins
HSP60 / Chaperonin
HF329_21135 (groL)
Mitochondrial biogenesis [BR:
coy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HF329_21135 (groL)
Exosome [BR:
coy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HF329_21135 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HF329_21135 (groL)
Exosomal proteins of breast cancer cells
HF329_21135 (groL)
Exosomal proteins of colorectal cancer cells
HF329_21135 (groL)
Exosomal proteins of bladder cancer cells
HF329_21135 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QJB33682
UniProt:
A0AAE6ZJ39
LinkDB
All DBs
Position
5500591..5502219
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQLFFDLEARNKMKKGVDTLANAVKVTLGPKGRNVVLEKKFGASHITKDGVSVAKEIE
LEDPIENMGAQMIKEVASKTADIAGDGTTTATVLAQAIIGEGLKNVAAGANPMDLKRGID
KAVEAIVANLQTQAQPVGHTEEKIRQVAALSANNDDTIGKLIAEAFGKVGKEGVITVEEA
KGTDTTVEVVEGMQFDRGYLSPYFVTNPEKMQAELDNPYILICDKKISVMKDILHILEKT
AQSGRPLLIIAEDLDGEALATLVVNRLRGTLKIAAVKAPGFGDRRKDLLADIAILTKGTV
ISEEQGYKLENADLSHLGTASSVIITKDNTTIVGGHGNKEDIDGRIAQIRAQLSTTTSTY
DKEKLQERLAKLSGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAIEEGIVPGGGVAYV
RAVAALPDLKGLNADENTGIALVKRAVEEPLRQIVSNCGIEGSVVVQKIREGQGDYGFNA
RTEQYEPLLQAGVIDPAKVTRIALENAASIAGMLLTTECVVADKPKKEAPATAPAGMGGM
DY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaacttttctttgacctcgaagcaagaaacaaaatgaagaaaggcgttgac
accctggccaacgccgtgaaggttacactgggccccaaaggccgtaacgtagtactggaa
aagaaattcggcgcctcccacatcacgaaggacggcgttagtgtagccaaagaaatagag
ctggaagacccgattgaaaacatgggcgcccagatgattaaagaagtcgcctccaaaaca
gccgacattgcaggtgacggcaccaccaccgctaccgtgctggcacaggctattattggc
gaaggccttaaaaatgtagccgccggcgctaaccctatggacctgaaacgcggcatcgac
aaagcggtggaagccattgtggccaacctgcagacacaggcgcagccagtaggccatacc
gaagaaaagatccgccaggtagccgcactttccgccaacaacgacgatacgatcggcaaa
ctgatcgccgaagccttcggtaaagttggcaaagaaggcgtcattaccgtagaagaagcc
aaaggcaccgacactaccgtagaagtagtggaagggatgcagttcgaccggggctatctc
tctccctatttcgtgactaacccggaaaaaatgcaggccgagctggacaacccctacatt
ctcatctgcgataaaaaaatcagcgtgatgaaagacattctccatatcctggagaaaaca
gcccagagcggaagaccgctgctcatcatcgcggaagacctggatggtgaagcactcgcc
acactggtagtcaacaggctccgtggcacgctcaaaatagccgccgtaaaagcacccgga
tttggcgacagaaggaaagacctgctcgcggacatcgctatcctcaccaaaggcaccgtt
atcagcgaagaacagggctataagctcgaaaacgccgatctcagccacctcggtaccgct
tcttctgtgatcatcaccaaagacaataccaccatcgtgggcggccatggcaacaaagaa
gatatcgatggccgcattgcccagataagggcacagctcagcaccacgacttccacctac
gataaggagaaactacaggaaagactggctaagctcagcggtggcgtggccgtactgtat
gtaggcgctgctaccgaagtggaaatgaaagagaaaaaagaccgggtggacgacgccctg
cacgccacccgcgcagccatagaagaaggcatcgtacccggcggcggggtggcctatgta
cgtgcggtggcggccctgccggacttaaaaggactgaacgctgatgaaaacaccggcatc
gccctggtgaaaagagcagtggaagaacctcttcgccagatcgtctccaactgcggcata
gagggcagcgttgtggtacagaaaatcagagaaggccagggcgactacggcttcaatgcc
cggaccgaacaatatgaaccgttactacaggcaggcgttatcgaccccgctaaagtaacc
cgcattgcacttgaaaatgcagcttctatcgccggcatgttactcaccaccgaatgtgtg
gtggccgacaaaccgaagaaagaagctcctgccaccgcccctgcaggcatgggaggcatg
gactattaa
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