Chitinophaga oryzae: HF329_21560
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Entry
HF329_21560 CDS
T07451
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
coy
Chitinophaga oryzae
Pathway
coy00521
Streptomycin biosynthesis
coy00523
Polyketide sugar unit biosynthesis
coy00525
Acarbose and validamycin biosynthesis
coy00541
Biosynthesis of various nucleotide sugars
coy01055
Biosynthesis of vancomycin group antibiotics
coy01100
Metabolic pathways
coy01110
Biosynthesis of secondary metabolites
coy01250
Biosynthesis of nucleotide sugars
Module
coy_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
coy_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HF329_21560 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HF329_21560 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HF329_21560 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HF329_21560 (rfbB)
00525 Acarbose and validamycin biosynthesis
HF329_21560 (rfbB)
Enzymes [BR:
coy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HF329_21560 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QJB33761
UniProt:
A0AAE6ZIR3
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All DBs
Position
5607185..5608240
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AA seq
351 aa
AA seq
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MKRSILITGGAGFIGSHVVRLFVTKYPDYQIVNLDALTYAGNLENLLDVKDLPNYIFEKG
DITDEAFIDQLFGKYQFDGVIHLAAESHVDRSIMDPLAFIKTNVLGTAVLLNIARKYWKD
NMENKLFYHVSTDEVYGSLGEEGLFHETTAYDPRSPYSASKASSDHFVMAYYHTYHLPAI
ISNCSNNYGSHHFPEKLIPLAIHNIKNNKPVPVYGKGENVRDWLYVNDHARAIDTIFHRG
RIGETYNIGGFNEWKNIDLIQLLCRIMDKKLGRPEGTSAQLITYVKDRAGHDLRYAIDAT
KLNKELGWEPSLQFEEGLEKTVDWYLANEEWLQHVTSGNYQKYYQEQYQKR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaagcatactaattacaggtggagcaggcttcatcggttcacatgtagtcaga
ttatttgttacaaagtatcccgactaccagatcgtgaacctggatgcgctgacctatgcc
ggtaatctcgaaaacctgctggatgttaaagatctccctaattatatttttgaaaaggga
gatattacagacgaagcctttatcgatcagcttttcgggaagtaccagtttgatggtgtg
atacatctcgctgcagaaagccatgtggaccgttctattatggacccgctggctttcatc
aaaaccaatgtgctggggacggccgtattattgaacatcgcccgtaaatactggaaagac
aacatggaaaacaaactgttttatcatgtgtctaccgacgaggtgtacggttcgcttggc
gaggaaggacttttccatgaaacgactgcttacgatccgcgttcgccgtattcagcctcc
aaggccagctccgatcactttgtgatggcatattatcacacttatcatctcccggccatt
atctccaactgttccaataactacgggtcacatcattttccggagaaactgatcccgctg
gccatccataatatcaaaaacaataagccggtgcccgtatatggtaaaggagagaatgtt
cgcgactggttgtatgtcaacgaccatgcccgcgccatcgatactatcttccacaggggc
aggattggcgaaacctacaacatcggtggtttcaacgaatggaagaatatcgacctgata
cagctgctgtgccgtatcatggacaaaaaactgggccgccccgaaggtacttctgcccag
ctgatcacctatgtgaaagaccgcgccggccacgacctgcgctatgccattgatgccacc
aagctcaacaaggaactgggttgggaaccatcccttcagtttgaagaaggactggagaaa
acggtagattggtatcttgccaacgaagaatggctgcagcacgtcaccagcggcaattat
cagaaatactatcaggagcagtatcaaaagcgataa
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