Chitinophaga oryzae: HF329_21910
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Entry
HF329_21910 CDS
T07451
Name
(GenBank) leucine-rich repeat domain-containing protein
Organism
coy
Chitinophaga oryzae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
LRR_13
LRR_At5g56370
LRR_9
LRR_MHP1-HER1-GIP3
NPFF
LRR_CARMIL
Motif
Other DBs
NCBI-ProteinID:
QJB33827
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All DBs
Position
complement(5704417..5707524)
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AA seq
1035 aa
AA seq
DB search
MEHRHMYAEPGIVVLNDIKEAKNCPHPKVRFVLHNKRLKKLPDVQDAAHIPHVQFDLGYN
EALDHAAAISTLAALPQLKGLGMTKTKMSELPDSIGLLTGLEALEITGNQLKALPDSLPS
LKELRILNLRTNRFTTFPKNIAGLPKLEALSLRFNEIKTLPKEIAAFTSLRVLDLSSNSI
AVLPPAIKELSQLKELHMKYNKLTRLPEEMGELQELEVVALNGNKDLDFDQAFRVLANCK
KLKRLRLKGCGLRSLPESITLLESLESIDLYDNYFEEIPEVLLQLKQLQEIISSRPLPMP
FFINMIKDNPAHTSFSTTSLLPYIVNGKKTLPDSITALQHVRSLSLYGLETLPASLAQMT
WVQSLDIRDSTFDSWPDLSGLTALEKLSLSGETFPPLPDGLYRLPNLRKLTLPAHADGMD
YARLAQLSRLEELSVSAITDKDIRQLIPAPSLRWLHLPYDTPVLPDAFFELPGVDVFDFD
CYNEIDPAAVRPQLKRMPGLKSVRFGSAKEQSFDWYIQYLKELPAIKEATFYADSLQLPE
ALLELSHLDTLNIRFSSKALYSLVWQEKKPEIPLALGRAKRGQIVLEDRGALRPYRAAFT
QMATMDIPDGLRREVAFGLLAHQYNALHALLPYPFDAAGNITGAKVYVAGTPTLSGKKSL
AELLQHRGATMTKELKEATHLFLGQNIPVEAIGQLFQQECQYILEDHLKAQEIKDNTPFL
MTEENEALTEQITRLLADQHTNNIALILEMMEGGGAGKVLLSYLAAIHLFHKDTAIRKKS
RTLFKKYASAALQHHIKTNWKDRFKDRSEDNFRPLYLHPELDICAFVLAAQIAKREQNRG
SYRGESLVLRDMPASDISDVLVHFQHVSWLNLDLGDTTDLPRLVDYLRELPLKELYVRIT
TDEIPASLFTLPVELHVGCRREGGLTVPDLTGKEVRLKKFRMAYVPLKHAERLAACSELT
GLVLEFCEITDMTFITAMKNLVTAVLKGNRITEVPAALNQLQELETLRLDYNPFAPGSFD
FTQLKKLKDLVLPAA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggaacacagacacatgtacgccgaacccggtattgtagtactcaatgacatcaaagag
gccaaaaactgcccgcatcctaaagtgcgcttcgtcctgcataacaagcgcctgaaaaaa
ctgcctgacgtccaggatgcggcgcatatcccgcatgtacagttcgacctcggctacaac
gaggcgctggaccatgccgccgctatctccaccctggcggcgttgccgcagctcaaaggg
ctcggtatgaccaaaaccaaaatgagcgaactgccggacagcattggtctgttaacggga
ctggaagcccttgaaataacaggcaaccagctgaaggcgctgcctgacagtctgccgtcg
ctgaaagaactgcgtatcctcaacctgcggactaaccggtttaccacctttcctaaaaat
attgccgggctgccgaagctggaagcgctaagcctccggtttaatgaaatcaaaaccctg
cctaaggagatcgccgctttcacttccctgcgggtactggatctttcttccaacagcatc
gctgtgttgccgccggcgatcaaagaactgtcgcagttaaaagagctgcatatgaagtac
aataagctcacccggctgccggaggagatgggcgaactgcaggaactggaagtggtggcg
ctcaacgggaataaggacctggactttgaccaggccttccgggtactggcgaactgtaaa
aagctgaaacgcctgcggttaaaaggatgcgggcttcgctccctgccggaatccattacg
ctgctggaaagcctggaatccattgatctgtacgacaactattttgaagagataccggaa
gtactgttgcagttaaagcagctgcaggaaatcattagttcccgcccgctaccgatgccg
ttttttatcaatatgataaaggataatcctgcgcatacttctttcagcaccactagcctg
ttgccctatatagtgaacggcaaaaagaccctgccggacagcatcacggcgctacagcat
gtacgttccctgtctctttatggcctcgaaactttaccggcatcactggcacaaatgacc
tgggtacagtcgctggacatacgcgatagcactttcgacagctggcctgatctttccggc
ctgacagcgttggagaaattgtcgctgtcgggtgaaaccttccctccattaccggacggg
ttataccggttgccgaatctccgtaaacttacattgccagcgcacgcggatggcatggat
tatgcacggctggcacagctttcccggctggaggaactatcagtatcggctataacagac
aaggatatacgtcagctgatacccgcgcccagccttcgctggctgcatctgccatacgat
actcccgtgcttccggatgccttttttgagttgcccggtgtggatgtattcgattttgat
tgctataatgagatagatcctgctgcggtaagaccacagctgaaacggatgcccggcctg
aaatccgttcgttttggcagcgcaaaagagcagtcatttgactggtacattcaatacctg
aaagagttgccggcaataaaggaggctaccttttatgcagactcccttcagttgccggaa
gcattgctggagctgtcccatctggataccctgaatatccgtttcagcagcaaagcgctt
tacagcctggtgtggcaggagaaaaaaccggagataccactggcccttggccgcgccaaa
agaggacagattgtgctggaggaccgcggagcgttgaggccctatcgtgctgcttttacg
cagatggccactatggatatccctgatggcctccggcgcgaagtggccttcggcctgctg
gcacatcagtacaacgctttacacgcgctgctgccgtatccattcgatgcagccggcaat
atcaccggtgctaaagtatatgtagcgggaacgcctacactgagcggtaaaaaatcgctg
gcggagctgttgcagcaccggggcgctaccatgaccaaagagctgaaagaggccacccat
ttgtttctcggacagaacataccggtagaggcgattggccagctttttcaacaggaatgc
caatacattctggaagaccatctcaaggcgcaggaaattaaagataacacccctttcctg
atgacagaggagaatgaggcgctaacggaacagattacacgcttactggcagatcagcat
accaataacatagcactgatactggaaatgatggaaggtggcggcgccggcaaagtgttg
ctgagttatctcgcggctattcacctgttccacaaagacaccgccatccggaaaaaatcc
aggacgttgtttaagaaatacgcgtcggctgctttgcagcatcatattaaaacaaactgg
aaagaccggttcaaagaccggtcagaagacaatttccggccgctgtacctgcatccggaa
ttagatatatgcgcttttgtgttggctgctcaaatagcgaaaagggaacaaaatcgtggc
tcctacaggggagaaagcctggtactcagagacatgccagccagcgatatctccgatgtg
ctggtacattttcagcatgttagctggttgaatcttgatcttggcgatacaactgacttg
ccacgtctggttgattacctgagagaactcccgctgaaagaattgtacgtccgcattacc
accgatgaaataccggcatccctcttcacgcttccggtggaattgcatgtcggctgcagg
cgtgagggcggactgaccgtacctgatctcaccggcaaagaggtgcgccttaagaaattc
cggatggcatatgtgccactgaaacatgcagaaaggcttgcagcatgcagcgagttgaca
gggttggtcctggagttttgcgagattaccgacatgactttcattaccgcgatgaaaaac
ctggtgaccgcagtgctgaaaggcaaccgtattacggaggtgcctgcggctttaaaccag
ctgcaggagctggaaacactgcggctggactataatccgtttgcccctggctcgttcgat
tttacacagctgaaaaaactaaaggaccttgttttgccagccgcataa
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