KEGG   Chitinophaga oryzae: HF329_22910
Entry
HF329_22910       CDS       T07451                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
coy  Chitinophaga oryzae
Pathway
coy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:coy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HF329_22910 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:coy03400]
    HF329_22910 (uvrA)
DNA repair and recombination proteins [BR:coy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HF329_22910 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HF329_22910 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N UvrA_inter AAA_16 AAA_29 AAA_21 nSTAND1 AAA_23 nSTAND3 AAA_22 ATPase Viral_helicase1 nSTAND_NTPase5 AAA_33 RsgA_GTPase AAA_18 SLFN-g3_helicase NACHT cobW AAA_14 DnaJ_CXXCXGXG ATPase_2 NB-ARC Zn_ribbon_8 NTPase_1 MobB
Other DBs
NCBI-ProteinID: QJB36225
UniProt: A0AAE6ZP41
LinkDB
Position
complement(5971754..5974564)
AA seq 936 aa
MKTKKKETIIDPQPVNPQDNIFIKGARVHNLKNVSVSIPRNKMVVVTGVSGSGKSSLTMD
TLYAEGQRRYAESLSSYARQFLMRMNKPDVDYIKGICPAIAIEQKVITRTPRSTVGSMTE
IYDYLRLLFGRVGKTYSPVSGQLVKKHEVSDVTDFISNLEHGSKVLLMVPFRRHAKRDVK
EELNILMQKGFSRLYAPSAGGNGLLRIEELLEQKKPAVPADAWVLIDRLVVKDFEEDDKH
RIADSVQTAFYESEGDCYVEVDGKNVTHFANRFELDGIQFEEPVPNLFSFNNPYGACPTC
EGFGQVLGIDADLVIPDKRLSVFEGAIAPWRGEKMGEYKEALIKVARKFGFPVHKPIADL
TDEQVQLLWTGNEHFYGLNEFFKMVEQNLYKVQYRVLQARYRGRTVCHECGGGRLRKEAL
YIRVGDSNIARLVDMPVSDLKNWFDNLQLNEYDQQVAKRILFEINHRLKTLLDVGLGYLT
LNRVANTLSGGESQRIQLTRTLGSNLTNSMYILDEPSIGLHARDTHRLINVLKELRDLGN
TVVIVEHDEQMMEEADYIIDMGPLASHLGGEVIFAGTYPEILTDGKSLTGKYLSGNYRID
PPQKLRKWKKAITLEGCRQHNLKDISVDFPLEVLTVVTGVSGSGKTTLVKQILYPALMKL
KGEFAERVGYHKALKGAVDDITQIEMVDQNPIGKSSRSNPVTYIKAYDEIRDLFARQPLS
KMRGFQPKHFSFNVDGGRCDACKGEGEVIVEMQFLADVHLLCESCGGKRFKDEVLEVTYK
GKSIYEVLELGVDEALEFFKDEKDVCNKIRPLSDVGLGYVKLGQSSDTLSGGEAQRVKLA
SFLGKGKAQGKILFIFDEPTTGLHFHDIKKLLNSFNALIDQGHTVLVIEHNLDVIRSADW
VIDLGPEGGAGGGSLLYTGVPEGLKKVKESYTGKFL
NT seq 2811 nt   +upstreamnt  +downstreamnt
atgaaaactaagaaaaaagaaaccatcattgatcctcagccggttaacccgcaggacaat
atcttcataaaaggcgccagggtccacaatctcaagaatgtgagcgtctccatcccccgc
aataaaatggtggtggtgaccggcgtgtccggttcgggaaaatcttccctcaccatggac
accctgtacgcagaaggacaacgccgctacgcggaaagcctcagttcctacgcccgtcag
ttcctcatgaggatgaacaaaccggacgtggactatatcaaaggcatctgcccggccatc
gcaatcgaacaaaaagtgatcacccgcacgcctcgttccaccgtaggctctatgacggag
atctacgactacctccggttgttgttcggccgcgtcgggaaaacctattcccccgtttcc
ggccagctcgtgaaaaaacatgaagtcagcgacgtaacagactttatcagtaacctcgag
cacggcagtaaagtattgctgatggtacctttccgccgccacgcgaaaagagacgtgaaa
gaggagctgaatatcctgatgcagaaaggcttctcccgtttgtacgcgccgtcagccggc
ggcaatggcctgctgcgcatcgaagagctgctggaacaaaagaagccggccgtgcccgca
gacgcctgggtgctgatagacaggctggtggttaaagattttgaggaagatgacaaacat
cgtatagccgacagtgtgcagacagccttttacgaaagcgagggcgactgttacgtggaa
gtggacggcaaaaacgtgacccacttcgccaaccgcttcgagctggatggtatccagttt
gaagaaccggtgcccaatctcttctctttcaacaacccctacggcgcctgccccacctgc
gaaggttttggacaggtgctcggtatcgatgccgacctcgtcatccccgataaacgcctc
agcgtttttgaaggcgccatcgctccctggagaggtgagaaaatgggcgaatacaaagaa
gcgctcatcaaagtggcccgtaaattcggattcccggtacacaaacccatcgcagacctc
acagatgagcaggtgcagctgctgtggacgggcaacgaacacttctacggcctgaacgaa
ttcttcaaaatggtagagcagaacctctacaaagtacaataccgcgtgctgcaggcacgc
taccgcggacgtaccgtatgccacgagtgcggcggcggccgtttgcggaaagaagcgctc
tacatccgcgtaggcgacagcaacatcgcccgcctggtagacatgccggtatcagacctg
aaaaactggttcgataacctgcaactcaacgaatatgatcagcaggtggccaaacgtatc
ctgtttgaaatcaaccaccggctgaaaacattgctggacgtagggttaggatacctgacg
ctcaacagggtggccaataccctcagtggtggcgaaagccagcgtatacagcttacccgc
acgctgggcagtaacctcaccaactccatgtacatcctcgatgaaccaagcatcggtctg
catgcccgcgatacccaccgcctgatcaacgtgctgaaagaactgcgcgaccttggcaat
accgtggtgatcgtggagcacgacgagcaaatgatggaggaagccgattatatcatcgac
atgggcccgctggccagtcacctcggcggcgaagtgatcttcgccggcacttacccggaa
atactgaccgacggtaaaagcctgaccggcaaatacctgagcggcaattaccggatagac
cctccgcaaaaactgcgtaaatggaaaaaagctattaccctcgaaggctgccgtcaacat
aacctgaaagacatctccgtcgattttccgctggaagtgctgaccgtggtgacaggcgtg
agcggctccggtaaaaccacgctggtaaaacagatactgtacccggcgctgatgaagctg
aaaggcgaattcgcagaaagggtagggtaccacaaagcactgaaaggcgcagtggatgac
atcacccagatagaaatggtagaccagaacccgatcggtaaatcatcccgctccaacccg
gtgacctacatcaaggcatatgacgaaatccgcgacctctttgcccggcagccgctcagc
aaaatgcgcggtttccagcccaaacatttttctttcaacgtggacggcggccgttgcgac
gcctgcaaaggagaaggtgaagtgattgtggaaatgcagttcctcgcagacgtacacctg
ctgtgtgaaagctgcggcggtaaaaggtttaaagacgaagtcctggaagtgacctataag
ggcaaaagtatttacgaagtgctggagctgggcgtagatgaagctttggagttctttaaa
gacgaaaaagatgtctgcaataaaatccgcccgctgagcgatgtgggattaggctacgta
aaactgggacagagcagcgataccctgagcggtggtgaagcacaacgtgtgaagctggct
tccttcctcggtaaaggcaaagcgcagggcaaaatcctgtttatcttcgacgaacctact
acgggcctgcatttccatgatatcaaaaaactgctgaactctttcaatgcgctgatcgat
caggggcatacggtactggtgatagaacacaacctggacgtgatccgcagcgccgactgg
gtgatcgacctggggccggaaggcggcgccggcggcggaagtctgctgtacacaggcgtg
ccggaaggattgaagaaagtaaaagaaagttataccggaaaatttctttga

DBGET integrated database retrieval system