Chitinophaga oryzae: HF329_24220
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Entry
HF329_24220 CDS
T07451
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
coy
Chitinophaga oryzae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA
HTH_50
HTH_30
AAA_2
Mg_chelatase
P-loop_TraG
HTH_28
bpMoxR
AAA_16
nSTAND3
HTH_1
MCM
IstB_IS21
HTH_29
BrxC_BrxD
AAA_22
ABC_tran
HTH_23
RWP-RK
NACHT
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QJB36241
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Position
6271373..6272710
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AA seq
445 aa
AA seq
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MQPGKILIVDDDVDVLRAARLLLKRHFEQVDFEKNPQKIPYLVTNFDYDVILLDMNFTRD
LSSGKEGFEWLDRILDIKPDTAVVLFTAYGDVEMAVRAIKSGAVDFVLKPWENEKLLATI
QSAYNKRAAKLDKPPVVHNTGNLIVGNSPAMQAVFDTVSRVAATDANVLILGENGTGKDM
LARHIHQQSHRSGKPIVSVDLGAISETLFESELFGHVKGAFTDAREDRAGRFEEAAGGTI
FLDEIGNISIPFQAKLLTVLQNRSVTKVGSNKSIPIDVRLICATNRNIQQQAAQHLFRQD
LLYRINTIEIHLPPLRERREDIVPLAEHFLQLYREKYKRPVNSLHESLIQQLEKYEWPGN
IRELQHAMERAVILSQGKSLQAKDVFVKNNAAQDQQMDTGYNLEEMERNIITQAMKKCNG
NITEAAKELGLSRAALYRRLEKYNI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccggaaaaattctgatcgttgacgacgatgttgatgtattgcgtgcagcccga
ctgctgctgaaacggcatttcgaacaggtggattttgaaaaaaatccgcagaaaatcccg
tatctggtaaccaacttcgactacgacgttatactgctggatatgaacttcacccgtgac
ctcagcagcggtaaggaaggattcgaatggctggaccgcatcctcgacatcaaacccgat
acagccgtggtattgtttaccgcctacggcgatgtggaaatggcggtaagggccattaaa
tccggcgcagtggacttcgtgctcaaaccctgggaaaatgaaaaactactggccactatc
cagtcagcctacaacaaacgggcagccaaactggacaaaccgccggtagtacacaacacc
ggcaacctgatcgtaggcaacagcccggccatgcaggccgtcttcgataccgtttcccgt
gtagccgccaccgatgccaatgtactcatcctcggcgaaaatggcaccggcaaagacatg
ctggccagacacattcaccagcaatcacaccgcagcggaaaacctatcgtcagcgtagac
ctcggcgccatcagcgaaacactctttgaaagcgaacttttcggccacgtaaaaggcgcc
ttcaccgacgcccgcgaagacagggccggacgcttcgaagaagccgccggcggcaccatc
ttcctcgatgaaatcggcaacatctccatcccctttcaggccaaactcctgacggtgctg
caaaacaggtccgtcaccaaagtaggctccaacaagagtatacccatcgacgttagactg
atatgcgccaccaaccgtaatatccagcaacaggccgcccaacacctgttccgccaggac
cttctctaccgcatcaacaccatcgaaatacacctgcctcccctgcgcgaacgccgggaa
gacattgtaccactggcagaacatttcctgcaactgtaccgggagaaatataaacgcccg
gtcaacagcctgcatgaatcgctcatccagcaactggagaaatatgaatggcccggtaat
atccgcgaactgcagcacgccatggaaagggccgtgatcctttcccagggcaaatccctg
caggccaaagacgtgttcgtgaaaaacaacgccgcgcaggaccagcaaatggataccggc
tataacctggaagaaatggaacgcaacattatcacccaggccatgaaaaaatgtaacggg
aatatcacagaagccgcgaaagaactgggcctcagcagagcggcactctaccggaggctc
gaaaaatacaatatttaa
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