Chitinophaga oryzae: HF329_24280
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Entry
HF329_24280 CDS
T07451
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
coy01002
]
HF329_24280
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
HF329_24280
Peptidases and inhibitors [BR:
coy01002
]
Cysteine peptidases
Family C82
HF329_24280
Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HF329_24280
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QJB34238
UniProt:
A0AAE6ZLB9
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Position
complement(6282630..6284351)
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AA seq
573 aa
AA seq
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MKVHFYTALSLLALIIFAACQQNGGFRKRLKIRDTTHYTKEAYIEESLDSNLLNKFLATN
TNFDPYDEYIRNFYQKRGYHYAWINKDSLTEQAANFINMMKNDASYGIKDSSLLNPELQQ
LTDTLLLSDAGLRIADTARPRLEMLLTAQFFAYGNKVWGGLTADSAKDLEWFIPRKKIDM
ESLLDSVVRKKSNAFEEDEPVNRQYKLLRSELKKLANLEASTKWDSVRLAAKATFKKGDS
SAVIVAVKNKLAALGDLAVNDSSSRFTPELDSAVRTYQARMGQKVDGIVKQTTADALNVP
LQQRIRQILVNMERSRWVPLEPTTDYILVNIPAFTMYVYDKGKLDWSCNVVVGKPGANTV
VFSKDLRYIVFSPYWNVPPGILAKEVLPGLKRSGGGYLARQNMEIVGASGKVIPPGSINF
SKYSGGNFPYVVRQRPGGRNSLGKVKFLFPNEYNIYLHDTPARYLFGENKRSFSHGCIRV
AEPKHLAEWLLRADSAWTEKKIDEAMNAGKEKYATVKNKVPVFIVYFTAFVDSKGKLNFR
DDVYGHDARLAATLFGSNEPKPAKGPEESAEKY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacatttttacaccgccctgtctttattggccctcattatctttgctgcctgc
cagcaaaacggaggctttcgaaaaaggctgaaaatcagagatactacacattacactaaa
gaagcgtatattgaagagtcgctggatagtaacctgctcaacaaattcctggcaacgaac
actaactttgacccgtatgatgaatacatccggaacttctaccagaaacgggggtatcac
tatgcctggatcaataaggattcgctgacagaacaggcggccaacttcatcaacatgatg
aaaaacgacgcttcctatggtattaaagacagcagcctgctcaaccccgagctgcagcag
cttaccgacaccctgctgctcagcgacgccgggctccgcattgccgatacggcccgcccg
cgcctcgaaatgctgctcaccgcccagttctttgcctatggcaataaggtatggggcggc
ctcactgccgattcggccaaagacctcgaatggttcattccccgtaaaaagatcgatatg
gaaagcctgctggactcggtagtccgcaagaagtccaatgcttttgaagaagatgaaccg
gtgaaccgccagtacaaactgctgcgcagcgaactgaagaagctggctaaccttgaagcc
tcaacgaaatgggattccgttcgcctggcagcaaaggctaccttcaaaaaaggagattcc
tccgcggtcatcgtcgctgtaaaaaataaactggcagcactgggcgacctcgctgtcaac
gacagcagcagccggtttacaccggagctggacagcgccgttcgcacttaccaggcacgg
atgggccagaaagtggatggtatcgtcaaacaaacgacggccgacgcgctgaacgtgcct
ttacagcaacgcatccgccagatactggtgaacatggaacgctcccgctgggtaccgctg
gagcccactacagactatatcctggtaaacatccccgcctttaccatgtatgtgtacgat
aaagggaaactggactggagctgtaatgtagtggtaggcaaacccggcgccaataccgtg
gtattctccaaagacctgcgttatatcgtgttcagcccttactggaacgtacctccgggc
atcctggccaaagaggtgttgcccggccttaaacgcagcggcggcggctacctggcccgt
cagaacatggagatcgtaggcgccagcggcaaagtgatcccgccaggctccatcaacttc
agcaaatattccggtggtaatttcccctatgtggtaagacaacgccccggcggcagaaac
tccctgggcaaggtgaaattcctgttccccaacgagtataacatctatctgcatgatacg
cctgcacgttatcttttcggggaaaacaaacgttctttcagccatggctgtatccgggtg
gcagaacctaaacacctggcagaatggctgctgagagctgattctgcctggacggagaaa
aagatcgacgaagccatgaatgccggtaaagagaagtatgcaacggtgaaaaataaagta
ccggtgttcattgtttactttacggcatttgtggacagcaaaggaaaactgaacttccgg
gacgatgtgtacggccacgatgcaagactggcagccaccttgttcggcagtaacgagcct
aagccggcaaagggacctgaagaaagcgccgaaaaatattaa
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