Chitinophaga oryzae: HF329_24295
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Entry
HF329_24295 CDS
T07451
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coy03032
]
HF329_24295
03036 Chromosome and associated proteins [BR:
coy03036
]
HF329_24295
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_24295
DNA replication proteins [BR:
coy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HF329_24295
Chromosome and associated proteins [BR:
coy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HF329_24295
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HF329_24295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
QJB34241
UniProt:
A0AAE6ZJN0
LinkDB
All DBs
Position
complement(6287437..6287724)
Genome browser
AA seq
95 aa
AA seq
DB search
MRKADLINNIAEKTGIPKVDVLVTLEAMFKEVKEALANGEHIYIRGFGSFITKKRAAKIG
RNIKKNVAVEIPEHFIPAFKPSKEFVAEVKKLKSS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagctgatttaataaacaacattgctgaaaaaaccggcatccccaaagtagat
gttctagtgacactggaggctatgtttaaagaggtgaaagaagccctggccaatggtgag
cacatttacatccgcgggtttggtagttttatcacaaagaaacgggccgccaagattggc
cgcaacatcaagaagaacgtagctgtggagattccggagcactttattccggcattcaag
ccttcgaaagaatttgttgctgaggtaaagaagctcaaaagttcttag
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