KEGG   Chitinophaga oryzae: HF329_24565
Entry
HF329_24565       CDS       T07451                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
coy  Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:coy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:coy03032]
    HF329_24565
   03036 Chromosome and associated proteins [BR:coy03036]
    HF329_24565
   03400 DNA repair and recombination proteins [BR:coy03400]
    HF329_24565
DNA replication proteins [BR:coy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HF329_24565
Chromosome and associated proteins [BR:coy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HF329_24565
DNA repair and recombination proteins [BR:coy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HF329_24565
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg TFIIA_gamma_N
Other DBs
NCBI-ProteinID: QJB34292
UniProt: A0AAE7D9I7
LinkDB
Position
6345004..6345273
AA seq 89 aa
MNKAELIDKLAKDAGITKTQANEALDSFTKAVADTLKKGGKVTLVGFGTFSVSKRAARNG
RNPQTGQIIKIKAKKVAKFKAGKALSDKL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacaaagccgaattaatcgacaaacttgctaaagacgcaggaatcactaaaacccaa
gctaacgaagcgctggactctttcactaaagctgttgctgataccctgaaaaaaggtggt
aaagtaacactggtaggtttcggtactttctctgtttctaaacgtgctgcacgtaacggt
agaaacccgcagactggccagatcatcaagatcaaagctaagaaagttgctaagttcaaa
gctggtaaagctttatccgacaagctctaa

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