Chitinophaga oryzae: HF329_25920
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Entry
HF329_25920 CDS
T07451
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_25920
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_25920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
MG4
CILP
Big_1
Motif
Other DBs
NCBI-ProteinID:
QJB36256
UniProt:
A0AAE6ZQ11
LinkDB
All DBs
Position
complement(6663673..6666624)
Genome browser
AA seq
983 aa
AA seq
DB search
MKTRLFRHLFLCTCFMLLQGLLMAQNRTVTGKVTDEKGAPIPGASVLVKGTKSGTTTDPD
GNFKVSVGPSANTLIVSFIGQTAQEISITNKTHVDVKLVAENTTLTDVVVVGYGTTRKKD
ITGAISQVKAADFNRGITSAPDQLIQGKVSGLMVLNNSGAPGASATVRIRGVSSVRSGNQ
PLYVIDGVPLDGRVARPSINVSGLGQTPDANPLNFINSSDIASMDVLKDASATAIYGSRG
ANGVIIISTKKGTPGATRLDVAYSVGASNIMKQLDVLDADEYRSALKTYNLTGGDYGSSS
NGMKSILRTGITHNINVAMSGGNETSRYRASFGVQDQEGIVKKSGLKKYTATLNGQNKFL
DSKNLGIDYNIMAAQTTEQLAPITNDAGFTGSLVSMALQWNPTMALRNADGSLNILGEGS
AVNPEAMSQAYDDKVNISYILASISPYYKFNDNWEYRALYSINHQVGKRQTQVASFINIP
GIMKQGLAYYGNVELTTQLLTNTLSFNKQFNPAFNLNAVVGHEYQKFDYFGMGLGATGFP
TYAVKYTDILQAPAQANTNISSFRNPSSELQSFFGRATFNLYDKYILTGTLRADGSSKFG
SNNKYGYFPSFAAKWNITGEDFLKGNKTINNLALRLGYGATGNQEFPAGAAQEQYGLGAS
GSAALTNVANPNLKWESSKQFNAGIDFSLVDNRIYGSVDYFYKNTSNLLFSFPAIQPAPA
STYWINLPGNVINNGVEVSLKGDIVRNKDLRWTLGVNGTVLRNELKNYDGPPVLTGAISG
QGVSGATAQRLANGYPLNTFYVRKFEGFDDKGQAKYADNGNTLYYLTNPNPKALLGINTE
VVFKKWVLAASGHGAFGHEVYNNTANTVLPIGNLGSRNIAKSILGNGEALSNPITVSSRY
LEKGNFFKLDNVTLTYNIGNVGRVLKNASVYATGQNLFVITKYSGFDPEVNTDKNVNGVT
SFGIEYGPYPTARTVMLGILFSL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacgacttttcaggcatcttttcctgtgcacatgtttcatgttgttacagggt
ctgctcatggcccagaacaggaccgtgacaggtaaagttacggatgaaaaaggcgctcct
atccctggtgcttccgtgctggtcaaaggcactaaaagcgggaccaccaccgatcctgac
ggtaatttcaaagtatctgtcggccccagcgccaacacactgatcgtttcctttatcggc
caaaccgcacaggaaatcagcattaccaacaaaacgcatgtagatgtaaaactggtggcc
gaaaacaccacgctcaccgacgtagtggtggtaggttacggcaccacccgtaagaaagat
attaccggcgccatttcccaggtgaaagccgcggacttcaaccgtggcatcacctccgcc
ccggaccagctgatccagggtaaagtatccggtctgatggtacttaacaacagcggcgct
cccggcgcctccgccaccgtgcgcatcaggggcgtatcctctgtaaggtccggcaaccag
cctctgtacgtgattgacggggtgcctctcgacggacgtgtggcccggccctccatcaat
gtcagcggccttggccagacaccggatgccaacccgctcaactttatcaactccagcgat
atcgcctccatggacgtactgaaagacgcttccgccaccgcgatctacggctcccgcggc
gctaacggcgtgatcatcatcagcaccaaaaaaggcacgcccggcgccacccgcctcgat
gtggcctattctgtcggcgccagcaacatcatgaaacagctggacgtactcgatgcagac
gaataccgctccgcactcaaaacctataacctgacaggcggcgattacggcagcagttcc
aatggcatgaagtccatccttcgcaccggcatcacccataatattaatgtggccatgagc
ggcggcaacgaaaccagccgttaccgcgcctccttcggcgtacaggaccaggaaggtatc
gttaaaaaatccggcctgaaaaaatataccgccaccctcaacgggcagaacaaattcctt
gacagcaaaaacctgggcatcgactataacatcatggctgcccaaaccaccgagcaactg
gcgcccatcaccaacgatgccggcttcaccggcagccttgtgagtatggcattgcagtgg
aatcccactatggccctccggaatgccgacggctcgctgaacatcctcggcgaaggcagt
gccgttaacccggaagccatgtctcaggcctacgacgataaagtaaacatcagctatata
ctggccagcatatctccctattataaattcaatgacaactgggaataccgtgccctgtac
agcatcaaccaccaggtaggcaaaagacagacacaggtagcttcttttatcaatatcccc
ggtatcatgaaacagggcctggcttattacggtaatgttgaactgaccacccagttgctg
accaacaccctgagctttaacaaacaattcaacccggccttcaacctgaacgccgtagta
ggccatgaatatcaaaaatttgactatttcggtatgggcctcggcgctaccgggttcccg
acttatgccgtaaaatatactgacatcctccaggcgcccgcacaggccaataccaatatc
agttctttcagaaaccccagctccgagctgcagtctttcttcggaagagccactttcaac
ctctatgataagtacatcctcaccggtaccctgagggccgacggctccagtaaattcggt
tccaacaacaaatacggctacttcccgtcttttgctgccaaatggaacatcaccggtgaa
gatttcctgaaaggcaataaaactatcaataacctcgcactgaggttaggttatggcgct
accggcaaccaggaattccctgccggcgcggcacaggaacaatacggcctgggggcttcc
ggctccgctgccctcaccaacgtggccaaccccaatctgaaatgggaaagctccaaacag
ttcaatgcgggtatcgacttcagcctggtagacaaccgcatctacggcagcgtggactac
ttctataaaaataccagcaacctgctgttcagcttccccgccatccagccggcgcctgca
tccacctattggatcaacctgccgggcaatgtgatcaacaacggggtggaagtatccctc
aaaggcgacatcgtacggaataaagacctgcggtggacattaggcgtaaacggtaccgtg
ctgcgtaatgaactgaaaaactacgacggccctccggtactcaccggcgctatcagcggc
cagggcgtttccggggccaccgcacaacggctggccaacggttatccgctgaacaccttc
tatgtgcgcaagttcgaaggcttcgatgataaaggccaggcgaaatacgccgacaacggc
aacaccctgtattaccttaccaatcccaacccgaaagcactcctcggtatcaacaccgaa
gtggtattcaagaaatgggtactggctgccagcggccacggcgccttcggccatgaggta
tacaacaacaccgccaacactgtactgcctatcggcaacctcggctcccgcaacattgcg
aagtccatcctgggcaacggagaagcgctctccaatcctatcaccgtgtcttcccgttat
ctcgaaaaaggcaacttcttcaaactggataacgtgacgctcacctataacatcggtaac
gtaggccgcgtcctgaaaaatgcatccgtatatgctaccggccagaacctcttcgtgatc
accaaatacagcggcttcgatcctgaagtgaataccgacaaaaacgtgaatggtgtgacc
tccttcggcattgaatacggtccgtatccaaccgccagaacggtcatgctcggcatcctg
ttttccttgtaa
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