Chitinophaga oryzae: HF329_26645
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Entry
HF329_26645 CDS
T07451
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
coy
Chitinophaga oryzae
Pathway
coy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HF329_26645 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
coy01007
]
HF329_26645 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coy03016
]
HF329_26645 (lysS)
Enzymes [BR:
coy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HF329_26645 (lysS)
Amino acid related enzymes [BR:
coy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HF329_26645 (lysS)
Transfer RNA biogenesis [BR:
coy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HF329_26645 (lysS)
Prokaryotic type
Other AARSs
HF329_26645 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QJB34683
UniProt:
A0AAE7D9Q8
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All DBs
Position
6840414..6841922
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AA seq
502 aa
AA seq
DB search
MTQLSEQEIIRREKLQELQKLGIDPYPAAEYPVNDTSVNIKNNYSEATKEQFQDVCLAGR
IMSVRDMGKAAFVELQDKAGRIQLYVRRDDICPGEDKTAYDVVFKKLMDIGDIIGVKGYA
FITKTGATSIHAREVNILSKSLRPLPIVKSVEGQVFDEVTDPEFKYRQRYVDLVINPEVK
DVFVKRTKILQTIRDFYNNLGYLEVETPILQPIPGGATARPFVTHHNALDMPLYLRIANE
LYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNPEFTVMEMYAAYKDYEWMMRTTETLLEKV
AVALHGTTEVLVGEKTIDFKAPFRRVPMYDAIKEHTGFDIDGMDEAQLRDVCKQLGIHVD
AKFGKAKLIDEIFGEKCEGHYVQPTFITDYPVEMSPLTKKHRSKAGLVERFELIVNGKEI
ANAYSELNDPIDQRERFEEQVQLMERGDDEAMYIDYDFLRALEYGMPPTSGIGIGIDRLT
MLMTNQPSIQDVLFFPQMKQEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattatctgagcaagagattatacgccgggaaaaattacaggagctgcaaaaa
ctgggcatcgacccctaccctgcggcagaatacccggtcaatgatacttccgttaacata
aaaaataactattcggaagccaccaaagagcaattccaggatgtatgcctggcaggtcgt
atcatgagcgttcgtgatatgggcaaggccgcttttgtggaactccaggataaggccggc
cgtatccagctgtatgtacgccgcgacgacatctgtcccggtgaagacaagaccgcgtac
gacgttgtttttaagaaactgatggatatcggtgatatcatcggtgtaaaaggctatgct
tttatcaccaaaaccggcgctacctccattcatgcaagggaagtgaacatactgtccaaa
tccctgcgtccgctgccgatcgttaaatccgtggaaggacaggtgtttgacgaggtgacc
gatccggaattcaaataccgtcagcgttatgtggacctggtgatcaacccggaagtgaaa
gatgtgttcgtaaaaaggaccaaaatcctccagaccatccgtgatttctataataacctg
ggctacctggaagtggaaacaccgatcctacagcctatccccggcggcgctaccgcccgc
ccgttcgtgacacaccacaacgcgctggatatgcctttgtacctgcgtatcgcgaacgaa
ttatacctgaaacgcctgatcgtaggcggttttgaaggggtatacgaatttgcgaaggac
ttccgtaacgaaggaatggaccgtacccataacccggaattcaccgtcatggagatgtac
gccgcctacaaggactacgaatggatgatgcgcaccaccgaaaccctgctcgaaaaagtg
gcggtggcgctgcatggcactacggaagtactggtgggcgagaaaaccatcgacttcaaa
gcgcctttccgccgcgtccccatgtacgacgctattaaggaacataccggcttcgatatc
gacggcatggacgaagcacagctccgcgatgtatgcaaacagctgggcatccatgtagac
gccaaattcggtaaagccaaactgattgacgaaatttttggcgaaaaatgcgaaggccac
tacgtacagccgacctttatcaccgattacccggtggaaatgagcccgctgacgaaaaaa
caccgcagcaaagccggactggtagaacgttttgagctgattgtcaacggtaaagagatc
gccaacgcctacagtgagctgaatgatcctatcgaccagcgcgaacgcttcgaagaacag
gtacagctcatggaacgtggcgatgatgaagccatgtatatcgactacgatttcctccgc
gccctggaatatggcatgccgcctacttccggcatcggtatcggtatcgatcgtctgact
atgctgatgaccaaccagccgtccatccaggacgtcctgttcttcccgcagatgaagcag
gaaaaatag
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