Chitinophaga oryzae: HF329_26905
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Entry
HF329_26905 CDS
T07451
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_26905
Transporters [BR:
coy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HF329_26905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_6
TPR_12
Motif
Other DBs
NCBI-ProteinID:
QJB34733
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All DBs
Position
6908586..6910211
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AA seq
541 aa
AA seq
DB search
MTKKFRYQYNGNITRVVAGVLLIAAGLSSCSKFTELTPKNQLADNTVFKDSAQVELALNG
VYNAAAIGSYNDSYTAGRGYPFGAASIEQGEMRGEDMINLEGFYEITYKAQYSPTSANNV
NMWVNLYALINQANTFIEGAQAAATTGIISSGKALQLESEARFLRALAHHELLIHFCRPY
ASKNGGEVGIPYRTIAMNSVSKIDEALKVGRGTVAEAYDKLLADLDFAEANLNGSTKFGY
NHATKGAVIALKMRVKLHKGDYTGVIAEGTKLGTAAAGTSFNSPVNGYALAASPDEPFTK
NDKNSESVFSIANSALANGDTNGALPSMFLPSTSGGRGLVATSPNLYNAAFWAEDDLRRS
LLQIKQTTTKDGKPVDNYYFSYKYRDGLNKSDWAPIIRYAEVLLNAAEAYARTGNTAQAF
ALYNAVRNRSLPAASPNRITTPPADMMLAILNERRVEFAGEGRRWPDIHRLALDPVYSAK
GIPAKVLKSDLKTDGSDYNVVTKPVVKPSYNAISYTDFRFIWPVPSTETASNPNLKQNPE
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaattcagatatcaatataacggaaacattaccagggttgtagcgggagtg
ctgctgatagcagccggtttgtcttcctgcagcaagttcacagaactcactcctaagaac
cagttggcggacaatactgtttttaaggattctgcgcaggtggagcttgcattgaacggc
gtgtataacgctgctgccatcggtagctacaacgatagctataccgccggccggggttat
cctttcggcgctgcttccattgagcagggcgagatgagaggggaagatatgatcaacctc
gaagggttttatgagatcacctataaagcccagtattcccccacgtctgccaacaacgtc
aatatgtgggtgaacctgtatgcgctgatcaaccaggcaaataccttcattgaaggggcg
caggctgctgcaacaacgggaattatctcttccggcaaggcgctgcagctggagtccgaa
gcacgcttcctgcgcgctttggcccatcatgaactgctgatccacttctgcaggccttat
gcttccaaaaatggcggtgaagtggggatcccctaccgtaccattgcgatgaactcggtt
tcaaaaatagacgaagcgctgaaagtaggcagaggcacggtcgcagaagcatacgacaaa
ttgctggccgacctggatttcgcagaagctaacctgaacggtagtacgaaattcgggtat
aaccacgctacaaaaggagcggttattgctctcaaaatgagagttaagctgcacaaaggc
gattataccggtgttattgcagaaggtaccaaactgggtactgctgctgccggaacgtct
ttcaacagcccggtcaacggatatgcactggctgccagtcccgacgaaccattcaccaag
aacgataaaaacagcgagtccgttttctctattgcgaacagtgcattggccaatggagac
accaacggcgccctgccttccatgttcctgccctccaccagcggtggccgcggcctggta
gctaccagtcctaacctgtacaatgctgcgttctgggcggaagacgacctgcggagatca
ttgctgcagatcaaacaaacgactaccaaagacggcaagccggtggataactactacttc
agctataaataccgcgatgggctcaataagtccgactgggcgcctattatccgttatgcg
gaggtgctgctgaatgctgcggaagcgtatgcccgtactggtaataccgctcaggctttt
gccctgtacaatgcggtacgtaacaggtccctgcctgctgccagtccaaacaggatcacc
acgcctccggcagatatgatgctggccatcctgaacgagcgtcgtgttgaatttgccggc
gaaggacgccgctggccggatatccaccgcctggcgctggatccggtatattctgcgaaa
ggtattcctgccaaggtgctgaagagtgatcttaaaacagatggcagtgattacaatgtg
gtcactaaaccagtggtaaaacccagctataacgcgatctcctatacggacttccgtttt
atctggcctgttccatccactgaaactgcttccaatcctaatctgaagcagaatcctgaa
tactag
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