Chitinophaga oryzae: HF329_27180
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Entry
HF329_27180 CDS
T07451
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coy03032
]
HF329_27180 (gyrB)
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_27180 (gyrB)
Enzymes [BR:
coy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HF329_27180 (gyrB)
DNA replication proteins [BR:
coy03032
]
Prokaryotic type
DNA Topoisomerases
HF329_27180 (gyrB)
DNA repair and recombination proteins [BR:
coy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF329_27180 (gyrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QJB34783
UniProt:
A0AAE6ZMQ9
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Position
complement(6977001..6978980)
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AA seq
659 aa
AA seq
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MSEELVQATSPSSNYDAGSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVYEVVDNSIDEA
LAGYCKNIEVTICEDNSIRVKDDGRGIPTGIHPKEGRSALEVVMTVLHAGGKFDKNTYKV
SGGLHGVGVSCVNALSTRLHVTVQTEGKLFEQEYHRGIPQYAVREIGVSETTGTTVHFKP
DSEIFNETTYNREILAGRLRELAYLNRKIRITLSDEREKDEEGNIFSETFYSEGGIREFI
QMLDKNGRRNPLLPTPIYVETHDAASNVAVEVALVYNDAFSENIFSYVNNINTIEGGTHV
AGFRRAITRVFKAYGDKNKLFEKSKVEVTGDDFREGLSAIISVKVPEPQFEGQTKTKLGN
SDVMGVVDSSVAAVLDAFLEENPREAKTVINKVVLAAQAREAARKARQLVQRKSVMTGSG
LPGKLADCSDNDPVKCELFLVEGDSAGGTAKQGRNRNFQAILPLRGKILNVEKAMEHKIY
EDNEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRYM
KAMVEQGYVYIAQPPLYLVKKGKEQIYAWTEEQRKAATIQLAAGGKEDSVNVQRYKGLGE
MNAEQLWDTTMDPEKRTLKQVTIESAAEADRVFSMLMGDEVPPRRAFIESHAKYAKIDA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaattagtgcaagcaaccagccccagcagcaactatgatgcggggagtatt
caggtattggaaggactggaagcggtgcgcaagcgtccggccatgtatattggcgacatt
ggcatcaaagggcttcaccacctggtatatgaagtcgtggacaactccattgacgaagcc
ctggctggctactgcaaaaatatcgaagtaacgatctgcgaggataactctatccgggta
aaggatgacggccgtggtatccccaccggtattcacccgaaagaaggacgctccgccctg
gaggtggtaatgaccgtgctccatgccggcggtaaatttgacaaaaacacctataaagta
tccggcggtctgcacggggtgggtgtcagctgcgtaaacgcactgagtacccggctgcat
gtgaccgtacaaacggaaggcaaactgtttgagcaggaataccaccgcggtatcccgcag
tacgcggtacgggagatcggggtcagcgagactaccggtaccactgtacacttcaaaccg
gatagcgaaattttcaacgaaacgacctacaaccgggaaatcctggccggccgtttaagg
gaactggcttacctgaaccgtaagatccgcattaccctgtccgacgaacgcgaaaaagac
gaagaaggcaacatcttctccgaaactttctacagcgaaggcggtatccgcgaatttatc
cagatgctggataaaaacggccgccgtaacccgctgctgcctacgcctatttacgtggaa
acccacgacgcggcgtctaacgtggcggtagaagtagcgctggtatacaacgacgctttc
agtgagaacatcttctcctacgttaataacatcaacaccatcgaaggcggtacacacgtg
gccggtttccgccgcgccatcacccgtgtgttcaaagcttacggcgataaaaacaaactg
ttcgagaagtccaaggtagaagtaaccggcgacgacttccgcgaaggcctcagcgctatc
atcagcgtgaaagtgcctgaaccgcagtttgaaggccagaccaaaaccaaactcggtaac
tccgatgtaatgggtgtggtagacagctccgtagctgccgtactggacgctttccttgag
gaaaatccccgcgaagcaaaaaccgtgatcaacaaggtggtgctggcagcacaggcccgt
gaagcggcccgtaaggcccgtcagctggtacagcgtaaaagcgtgatgaccggcagcggc
ctccccggtaaactggcagactgctccgacaacgatcctgtaaaatgtgaactgttcctg
gtcgaaggtgactcggcgggtggtacggccaaacaaggccgcaaccgtaacttccaggcc
atcctgccactccgtggtaagatcctcaacgtggaaaaagccatggaacacaagatctat
gaagacaacgagatcaaaaatatcttcaccgccctgggcgtaaccatcggcaccgaagaa
gacgacaaagccctgaacctctccaaactccgctatcacaagctgatcatcatgacggat
gcggacgtggacggtagccacatcgccaccctgatccttaccttcgtgttccgctacatg
aaagccatggtggaacaaggttatgtgtacatcgcacaaccaccgctgtacctcgttaaa
aaaggcaaggagcagatctacgcctggacagaagaacagcgtaaggccgctactatccaa
ctggctgccggcggtaaagaagacagcgtaaacgtacagcgttataaaggtctcggtgag
atgaacgcagaacaactgtgggatactaccatggaccccgaaaaacgcaccctgaaacag
gtaaccattgaaagcgccgcagaagccgaccgcgtgttcagcatgctcatgggcgacgag
gtacctccgcgcagggcgtttatcgaatctcatgcgaaatacgcgaagatcgacgcataa
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