Chitinophaga oryzae: HF329_28030
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Entry
HF329_28030 CDS
T07451
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
coy
Chitinophaga oryzae
Pathway
coy00300
Lysine biosynthesis
coy00470
D-Amino acid metabolism
coy00550
Peptidoglycan biosynthesis
coy01100
Metabolic pathways
coy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HF329_28030
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF329_28030
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HF329_28030
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HF329_28030
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
HF329_28030
Enzymes [BR:
coy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HF329_28030
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HF329_28030
Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
Precursor biosynthesis
Amino acid ligase
HF329_28030
Racemase
HF329_28030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QJB34947
UniProt:
A0AAE6ZLU8
LinkDB
All DBs
Position
complement(7178425..7180938)
Genome browser
AA seq
837 aa
AA seq
DB search
MYNAASINKTLKGELLQETGFSEIEHLLLDSRKLSFPETSVFIPLVSPRRNAHQYMEELY
RKGVSNFIVSEPVPLEKYPKANIILVKDTLQALHTLVAFHRQQFHIPVIGITGSNGKTIV
KEWLYQLLEKDYNIVRSPKSYNSQTGVPLSVWQMKPEHQLAIFEAGISQPGEMVNLEKII
RPTIGIFTNIGEAHSEGFLNIRQKINEKLVLFAKSDILIYCKDYLALNECVLSFHNQVGK
KENQEGGGGGPELFSWSRKTDADLRIVTIEKHDNQTRIEALYKQETLHINIPFVDEGSIE
NAIHCWALMLYLGKEQEVIQQRMDLLSNIAMRLELKQGINNSSVINDAYNLDLGSLTIAL
DFLQQQQQHATRTVILSDILQSGKSDATLYEEVADLLQKKGINKLIAIGKNIGREKKSFQ
QVEGLKTQFFNTTDEYVQQFNADDFENETILVKGSRVFQFERIGKLLEQKAHQTILEINL
SAIAHNVKQYQSLLKPGTKLMAMVKAFSYGSGSFEIANLLQFHGIDYLAVAYADEGVELR
RAGITMPIMVMNPEPASFDAILHWNLEPEIYSMGILLQFMEEVSAAGKTEFPIHIKLDTG
MHRLGFVKKDIPALSQALTANELLKVQSIFSHLAASEDPEKDALTQQQGRLFYEMSHELQ
KALSYTVIRHISNSSGITRHPELHLDMVRLGIGMYGLDYSNGIQDQLRNVSTLKTTVAQL
KNLEIGDSVGYGARWTAKAPAVTATVRIGYADGYPRRLGNGVGKMLIRGKLAPVIGAVAM
DMLMLDVTHIPDIMEGDEVIVFGQDLSVQQLADWADTIAYEILTGISQRVKRVYFQE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtgtataacgcagcaagcattaacaagacactcaaaggggaattgttgcaagagaccgga
ttttctgaaattgaacatctgttactggacagccggaagctgagttttccggaaacatct
gtgttcataccccttgttagcccccggcgcaatgctcatcaatacatggaggagctgtac
cgcaaaggggttagcaatttcattgtgagtgaacccgtgcctttggaaaaatatcctaaa
gccaacatcatcctggtaaaagatacgctgcaggccctgcatacgctggtagcattccac
cggcagcagttccatattcctgtcatcggtatcaccggcagcaacggtaaaaccatcgtt
aaagaatggctgtaccagttgctggaaaaggattacaacattgtacgcagcccgaagagc
tacaactcccagacaggcgtgccgctctccgtatggcagatgaaaccggaacaccagctg
gctatcttcgaggccggcatttctcagcccggcgagatggtgaacctggaaaagatcatc
cgtcctaccatcggtatctttaccaatatcggcgaagcccacagtgaaggatttctcaac
atccggcagaagatcaacgaaaagctggtcctcttcgccaaaagcgatattcttatctat
tgcaaagactatctcgccctgaatgagtgcgtattgtctttccacaaccaggtcggcaag
aaagaaaaccaggaaggcggtggcggcggtccggagctcttctcctggtcccgcaaaaca
gacgctgacctgcgtattgttaccatcgagaaacatgacaaccagacccgtattgaagcg
ctgtacaaacaggaaacactgcacatcaatattccttttgtagatgaaggctctatcgaa
aacgccattcactgctgggccctcatgctgtatctcggcaaggaacaggaagtgatccag
caacggatggacctgctcagtaacatcgccatgcggctggaactgaaacagggcatcaat
aacagctctgtgatcaacgatgcgtacaacctcgatctgggctcgctgaccattgcgctc
gatttcctccagcagcaacagcagcatgccacccgcaccgtcatcctgagcgatatcctg
caaagcggcaaaagcgacgccaccctatatgaagaagtggccgacctgttgcagaaaaag
ggcatcaataaactgatcgccatcgggaaaaacattggccgggaaaagaaaagtttccag
caggtggaaggcttaaaaacacagttttttaataccaccgatgaatatgttcagcagttc
aacgccgatgatttcgagaacgaaaccatcctggtgaagggctcccgcgttttccagttc
gagcggatcggaaaactgctggagcagaaagcgcatcagactatcctcgagatcaacctg
agcgctattgcacacaacgtgaaacaatatcagtcgttgctgaagccaggcaccaagctg
atggccatggtgaaagcattctcctatggcagcggcagctttgaaattgccaatctgctg
cagttccatggcattgactacctcgcggtggcctatgcagacgaaggtgtggaactgcgc
cgcgccggtattaccatgccgatcatggtaatgaatcccgagccggccagctttgacgca
atcctgcactggaacctcgaaccggaaatttattccatgggcatcctgttgcagtttatg
gaagaagtgagtgctgcaggcaagaccgaattcccgatccatatcaagctggacacgggt
atgcaccgcctcggctttgtgaaaaaggatatccccgcattgtcgcaggcgctgacagcc
aacgagctgctgaaggtacagtccattttcagtcaccttgccgccagcgaagacccggag
aaagatgcgctgacacagcagcagggccgtttgttctatgaaatgagccatgaactgcaa
aaagcgctgagttataccgtgatccgccacatttccaacagctccggcatcacccggcat
ccggaactccacctggacatggtaagactgggtattggcatgtacggcctcgattatagc
aatggcatccaggaccagctgcggaatgtcagcaccctgaaaaccaccgtggcacagctt
aaaaacctggaaatcggcgacagcgtgggctatggcgcccgctggactgccaaagcgccg
gcagtgaccgccaccgtacgcatcggttatgccgacgggtatccccgcaggctcggcaat
ggtgtcggcaaaatgctcatccgcggcaaactcgcccccgttatcggcgcagtggccatg
gacatgctgatgctggacgtgacgcatatcccggatatcatggaaggcgatgaggtgatc
gttttcggtcaggacctgtctgtacagcaattggccgactgggcggataccattgcctac
gaaatattaacaggaatttcacagcgggtgaaaagggtatattttcaggaataa
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