Chitinophaga oryzae: HF329_29990
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Entry
HF329_29990 CDS
T07451
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coy03400
]
HF329_29990
Enzymes [BR:
coy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HF329_29990
DNA repair and recombination proteins [BR:
coy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HF329_29990
Prokaryotic type
HF329_29990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJB35307
UniProt:
A0AAE6ZMJ4
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Position
7646202..7647506
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AA seq
434 aa
AA seq
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MKPVVNLCWFRRDLRLHDQAALYHALRDEHPVVPVFVFDTAILSDLENKTDRRVQFIHQT
LETMQLQLAAAGATLDVFYGTPEAAFQHWTSRYDVRKVFTNNDYEPYARDRDTAIAKWLK
SHGISFHSYKDQVIFEKKEVVKDNGDPYTIFTPYSKRWLATLTPFYYKPYPVEKYTGNWH
RQAALKIPSLKTMGFTAEQTAFPPADIPGKIIRHYDESRDIPAIQGTSRLGIHLRFGTLS
IRELVKAALKDNEIFLKELIWREFFQMVLWHFPEVTHSSFKKEYDRIVWRNNEKDFERWC
QGQTGYPIVDAGMRELNATGFMHNRVRMITASFLTKHLLIDWRWGEAYFAAKLLDYDLAS
NNGNWQWAAGCGCDAAPYFRVFNPSLQTQKFDKALQYVRRWVPELDEFSYPSPMVEHDMA
RKRALEVYGKAVSR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttgttaacctttgctggttccgccgcgatctgcggctgcacgaccaggct
gctttatatcatgctttaagagacgaacaccctgtcgtgcccgtgtttgtgtttgataca
gccatactcagcgacctggaaaataagacagaccgccgcgtacaattcattcatcagaca
ctggaaacgatgcagctgcagctggctgctgcaggggccacgctggatgttttttacgga
acacccgaagctgcctttcagcactggacttccaggtatgacgtccggaaagtatttacg
aacaatgattacgaaccgtatgcccgcgaccgtgatacggccatcgctaaatggctgaaa
tcacacggtatttcttttcatagttataaagaccaggtaatctttgaaaagaaagaagtc
gtgaaggataacggtgacccatatacgatatttacaccctatagtaaaagatggctggcc
acgctaacgcccttttattacaagccttacccggtggagaagtacacaggcaactggcac
cggcaggcggcgctgaaaataccttcgctgaaaacgatggggttcaccgctgaacaaacg
gcttttcctccggcagacatcccggggaaaattatccggcattatgacgaatcccgcgat
attcctgccatacagggcacttcccgtttggggatacatctgcggtttggcacgctcagt
atccgtgagctggtaaaggcggcgctgaaggataatgaaatattcctgaaagagttgatc
tggcgggagtttttccagatggtcctatggcatttcccggaggtaacacatagctcgttt
aagaaagaatatgaccgcatcgtatggcggaataatgaaaaggattttgagcgctggtgc
cagggacagacaggttatcccatcgtggatgcggggatgcgggaactgaatgccaccggc
tttatgcataaccgggtgcggatgatcaccgccagttttctgaccaaacatctgttgatc
gactggcgctggggagaagcttattttgctgccaaattgttggattacgatctggcctcc
aacaacggcaactggcaatgggcggcaggctgcggttgtgatgccgcgccttatttccgg
gtgtttaacccatccttgcagacacagaagtttgataaagcgttgcaatacgtccgccgt
tgggtgccggagctggatgagttttcttatccgtcgcctatggtagaacatgatatggcg
aggaagcgggcgctggaagtgtatggaaaggcggtttcacgttga
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