Chitinophaga oryzae: HF329_31420
Help
Entry
HF329_31420 CDS
T07451
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
coy
Chitinophaga oryzae
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
coy01002
]
HF329_31420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
HF329_31420
Peptidases and inhibitors [BR:
coy01002
]
Cysteine peptidases
Family C82
HF329_31420
Peptidoglycan biosynthesis and degradation proteins [BR:
coy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HF329_31420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF1161
Motif
Other DBs
NCBI-ProteinID:
QJB35572
UniProt:
A0AAE6ZMT5
LinkDB
All DBs
Position
8012565..8014187
Genome browser
AA seq
540 aa
AA seq
DB search
MLLACGHGKKHATPKKKQIVANIRQLDEVVKESITERLSAIQDNDGLMEDSLPAFRPEAL
QEFYKEKENASRWSKDGVPNAAAATMIDAIKQAEDVGLLPARYHEPALNTAWEQLSNDPA
AKKDAALWARMDVMLTDAFMRMASDLRFGAAPRDSVTLKADSLFTDTELTAKLHQVLEQG
EVTTLLHDLEPTHPGYVALKEGIRTFKEKYAGYHWDTLPLNYTDTPAFRLMVVDRLVQSG
HLDTTGKEIDSALIKTGVKAFQKEFNIYPDGVPGKRTVMALNRSVHDWVMQAAVNLDRWR
KLPDTLPKQYIMVNLPGYTLQVVDSGEVKLESRVIVGTPRTRTPILNSYMTNFMLFPYWR
VPYSIVFKEMLPAIKKDVGYLAAKNLEVIDASGNAVDPHTIDWSKLSKGHFPYVLRQMDG
LDNSLGIMKFNFRNKYSVYLHDTNNRGLFKNSMRAMSHGCVRVQQWDSLAQYLVSSPDTA
NHRGDSIRAWIDREEKRQVDLTRRVPIYFRYFTAEGKDGTLVFYDDIYAEDKVVRRQMGL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
ttgttattagcttgtggacatggaaagaagcacgcaacccccaaaaagaaacagattgtc
gccaacatccggcagctggacgaagtggtcaaagaaagtatcaccgaacgcttgtcagct
attcaggacaatgatggtttgatggaagacagtcttcccgccttccggcccgaagccttg
caggagttttacaaagaaaaggaaaatgccagccgctggtcgaaagacggtgtgccgaat
gctgctgccgccaccatgatagatgctatcaaacaggcggaagacgtaggcctgctgccg
gcgcgttaccatgaacctgcattgaacaccgcctgggaacaactcagcaacgatcctgcc
gccaaaaaagacgctgccttgtgggcacggatggacgttatgctgaccgacgcttttatg
cgaatggcgtctgacctgcgtttcggagcagcgccacgcgacagcgttacgctgaaagcc
gattccctgttcaccgacacagaactgacagccaaactccatcaggtgctggagcaggga
gaggtaaccaccctgctgcatgacctcgagcccacacatcccggctatgtggcgctgaaa
gaaggcatccgcactttcaaggaaaaatacgccggctaccactgggacaccttaccgctg
aactatacggatacacccgctttccgcctgatggtcgttgaccgcctggtacagagcggc
cacctggacactaccggcaaagaaatagacagtgccctgataaagacaggcgtaaaagcc
tttcagaaagaatttaatatctatccggacggcgtgcccggtaaaaggaccgtcatggcc
ctgaaccgctcggtacacgactgggtgatgcaggctgccgtaaacctcgaccgctggcgc
aaactcccggatacgctgcctaagcagtatatcatggttaacctgcctggctatacgctg
caggtggtggatagcggggaagtaaagctggaatcacgggtaatcgtggggacgccgcgt
acgcgtacgcctatcctgaactcctacatgaccaacttcatgttgttcccttactggcgc
gtgccctacagcattgtgtttaaagagatgctgccggctattaagaaagacgtgggatac
ctggccgctaaaaacctggaggtgatcgatgcgtccggcaacgccgtagatccgcatacg
atagactggagcaagttgtcgaaagggcacttcccgtatgtattacgacagatggacggg
ctggacaactcactgggcattatgaagttcaacttccgcaacaaatacagcgtatacctg
catgataccaacaaccgcgggttgtttaaaaactcaatgcgcgccatgagtcatggttgc
gtgcgggtgcaacagtgggacagcctggcgcagtacctggtgtcttcaccggacaccgca
aaccacagaggcgacagcatccgcgcctggattgaccgggaggagaaacggcaggtagac
cttacccgtcgtgtcccgatctacttccgttatttcactgcagaaggaaaagacggcacc
ctggtattctacgatgatatctatgcagaagataaagtagtacgcaggcagatgggactg
tag
DBGET
integrated database retrieval system
