Colwellia sp. PAMC 20917: A3Q34_00655
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Entry
A3Q34_00655 CDS
T04511
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_00655
Enzymes [BR:
coz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3Q34_00655
DNA repair and recombination proteins [BR:
coz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3Q34_00655
Prokaryotic type
A3Q34_00655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOW75518
LinkDB
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Position
complement(137031..138410)
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AA seq
459 aa
AA seq
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MLLWFRNDLRSHDNPALQYFLKNNQDNAPLKAVFFISEQQWQQHDWSAIKIDFIKRHAIA
LREELLSAGIELELVDAATFEDQVSYLQARCEKENINEIVANSEVEFNEQKRDKAIVALG
IKLSLFEADVIVPKGKVLNLSNQMYKVFTPFKRAWLTYVKQHSFDYLGKIATSTAKVSSA
DTLSDASISSGWPLVGDIEKHVLPTFFNEKISDYHDQRDIPSIKGTSGLSPYLAAGVISP
RYILRTLINAYPDILIASDSQEFSWLNEIIWREFYRNLMFHEQRLSKHQCFNEKYQGVHW
HYDKGLFDAWCQGKTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLIDWRLGEKYF
MSQLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIRQSERFDPKGIFIRKYLPELGSVP
DKNIHFPHLFIEKNKKNIYWPPVVDHKEARLKALAFYKV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgttactttggtttcgcaatgatcttagaagtcatgataatcccgcattacagtatttt
ttaaaaaacaatcaagataatgctccccttaaagccgtttttttcatctctgaacaacaa
tggcagcagcatgattggtctgctataaagattgattttataaaacgccatgccatagca
cttcgcgaagagcttttgtcagctggtattgagttagaattagttgacgccgctaccttt
gaagatcaggtttcatacttacaagctcgttgtgaaaaagaaaatatcaatgagattgtt
gccaacagtgaagtcgaatttaatgaacaaaaacgtgataaagctattgttgcactgggt
ataaagctcagtttatttgaagctgatgttattgtgcctaagggaaaagttcttaattta
tctaaccagatgtataaggtttttactccttttaaacgtgcctggttgacttatgttaag
caacatagctttgattatttaggtaaaatagcaactagtaccgctaaagtatcgtcagca
gatactctttctgatgcaagtatatcttctggttggccacttgttggtgacattgaaaaa
catgtacttcctactttctttaatgaaaaaatatctgattatcacgatcaaagagatatc
ccttccattaagggcacctcgggattgtcaccttatttagccgctggtgtcattagtccc
aggtatatattaagaactttaattaacgcctacccagacatattaatcgcttcagatagt
caagaattttcatggttaaatgaaatcatatggcgtgaattttatagaaatttaatgttt
catgaacaaaggctttctaaacaccagtgctttaatgagaagtaccaaggcgttcattgg
cattatgataaaggtttgtttgatgcttggtgtcagggtaaaacaggatatccactagta
gatgccgccatgagacaactcaatcaaacgggttggatgcataatcgacttcgtatggtt
gtcgcaagtttcttgactaagcatctattaatcgactggcgtcttggtgaaaagtatttt
atgagtcagctaatcgatggtgatttagcctctaataatggtggctggcaatgggcagca
agtaccggttgtgatgcacagccatactttagaattttcaacccgataagacaaagtgaa
cgttttgatccaaaaggcattttcatccgtaagtatttaccagagttgggaagtgttcca
gataaaaatattcactttccgcatttgtttatagaaaaaaacaaaaaaaatatttactgg
ccaccagttgttgaccataaagaagctaggttaaaagctctcgctttctataaggtataa
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