KEGG   Colwellia sp. PAMC 20917: A3Q34_02590
Entry
A3Q34_02590       CDS       T04511                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
coz  Colwellia sp. PAMC 20917
Pathway
coz03030  DNA replication
coz03430  Mismatch repair
coz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:coz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3Q34_02590
   03430 Mismatch repair
    A3Q34_02590
   03440 Homologous recombination
    A3Q34_02590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:coz03032]
    A3Q34_02590
   03400 DNA repair and recombination proteins [BR:coz03400]
    A3Q34_02590
Enzymes [BR:coz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A3Q34_02590
DNA replication proteins [BR:coz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A3Q34_02590
DNA repair and recombination proteins [BR:coz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A3Q34_02590
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AOW78959
LinkDB
Position
complement(594690..595415)
AA seq 241 aa
MNNEQAVQQDERLIILDTETTGINPREGHRIVEVGCVEMINRQLTGRSFHVYINPLFEMD
QEVINIHGLTNEFLRDKPLFSQVADDFIEFIKGARLVIHNAKFDIGFMDNEFALLKRNIP
NTRDMCTVIDTLHVSKDEFGSPKTLDYLARYYRVDKLVDRTYHGALIDAQLLAFVYVEMT
RKQSVLNLSAGSESGDSNAIRRLPAQRTKLKVIQASADELIKHSERLAIVAEKGSEPIWP
K
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaataacgaacaagccgtacaacaagatgaacgattaattatattagatacagaaaca
acgggtattaatcctagggaagggcaccgaattgttgaagtaggctgtgttgaaatgatc
aaccgacagttaaccggtcgtagttttcacgtttatatcaatccattatttgaaatggat
caggaagttatcaatattcacggattaaccaatgagttccttcgtgataaacctttattt
agtcaagtcgccgatgactttatcgaatttattaaaggtgcacgccttgttattcataac
gctaaatttgatatcggttttatggataatgaatttgctttattaaagcgaaatattccc
aacactcgtgatatgtgtactgttatagatacgttgcatgtttcaaaagatgaatttggt
tcaccaaagactcttgattatttagcccgttactatcgtgtcgataaattagtcgaccgc
acttatcatggtgcattaatcgatgctcaacttttagcgtttgtttatgtagagatgacg
cgtaagcagtccgtgttaaatctatcagcaggcagtgaatcaggtgacagtaatgctatt
cgtcgtttacccgctcaacgaacaaaattaaaggttatccaagcttctgccgatgaactc
attaagcatagtgaaagattagcgattgttgctgaaaaagggagcgaaccaatatggccc
aaatag

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