Colwellia sp. PAMC 20917: A3Q34_04730
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Entry
A3Q34_04730 CDS
T04511
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_04730
DNA repair and recombination proteins [BR:
coz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A3Q34_04730
TLS (translesion DNA synthesis) factors
Other SOS response factors
A3Q34_04730
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_22
Gemin6_C
Motif
Other DBs
NCBI-ProteinID:
AOW76222
LinkDB
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Position
1104845..1106533
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AA seq
562 aa
AA seq
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MLLHLNIQNFAIVRSLDIDWRKGMTTITGETGAGKSIAIDALGLCLGDRALTNVVRPNTK
KAELAATFDINKNISAQKWLKKNGLSLTDEHDAELDCECILRRVISAEGRSKAYINGSQV
PLAQLKDIAQFLISIHGQHDHQLIVKPAQQRKILDEYADHQHLLDDVQYYYQQWRNLNTE
LKQLQESKEQREAKLQLLQYQVTELDEFSLQTGEFQILESDYKRHSNGQSLLTGTLKALQ
TLSENENHNISDSLRNNCEQLNDLVHMDPKLANIANTLSEALILVEDANDELKHYYDKLE
LDPEAYQMIEDRYSLAIQLAKKHQVAPEHLPTLHLEIKQALHVINSDGSRLDTAYVDIEK
AKVHYLQSAQALSTSRVKSAKKLSKKITLSMKELNMNNGIFDVSVQQVNVEALSPFGLDE
INFLISLNPGQKLEAMNKVASGGELSRISLAMQVILADKVITPTLIFDEVDVGISGPTAA
MVGSKLQELAQNTQVICVTHLPQVACKGHQQLFVSKLTDGEFTETKVTELSANGRVQEIA
RLLAGNKITDNSLANAQELLAG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcttttacatcttaacattcaaaacttcgccattgtgcgctccctagatatagattgg
cgcaaaggtatgacaaccatcaccggagaaacaggtgcgggtaaatcaatagctattgat
gccttaggtttatgtttaggcgatagagcgctcactaatgttgtaagaccaaatactaaa
aaagcagagttagccgcaacctttgatataaacaaaaacatttccgcacaaaaatggctt
aaaaaaaatggcctatccctaacagacgaacacgatgctgagttagattgtgaatgtatt
ttacgccgagtaatatcagctgaaggacgctcaaaggcttacattaacggtagccaagtt
ccgcttgcccaacttaaagatatcgcacaatttttaataagtattcatggccaacacgat
caccaactcattgttaagccggctcaacagcgtaaaatacttgatgagtatgccgatcat
cagcacttattagacgacgttcaatattactatcagcaatggcgaaatctcaatacagaa
ctaaaacagttacaagaaagtaaagagcaacgcgaagcaaaactgcagttattacaatac
caagtgaccgagctagacgaattttcactacaaacgggtgagtttcaaattctagaaagt
gattacaaacgtcatagtaacggtcagtcattattgaccggcactttgaaagcattgcaa
actttatctgaaaacgaaaatcacaatatttcagacagcctaagaaacaactgcgaacag
ttgaatgatttagttcatatggatcctaagttagcaaatattgctaacaccttgagcgaa
gcacttattcttgtagaagatgctaatgatgaattaaagcactactacgataagcttgaa
ctcgatccagaagcttatcaaatgattgaagaccgctactcgctcgccattcaacttgct
aagaaacatcaagtggcacccgagcatttgccaacgttacacttagagataaaacaagcc
ttacatgtcataaattcagacggttcaagactagatacagcatacgtagacattgaaaag
gctaaagtacattacctacaatctgctcaggcgttatcaacatcaagagtaaagtcggct
aaaaaactcagtaaaaaaatcacgctgagcatgaaagagctcaatatgaacaacggcata
tttgacgtatcagtacagcaagttaatgttgaagctttatcgccgtttggccttgatgaa
ataaactttctcattagccttaacccagggcaaaaattagaagcgatgaacaaagttgct
tctggtggcgaattatcacgcattagtttagccatgcaggttattttggcggacaaggtg
atcacaccgaccttaatatttgatgaagttgatgtcggtattagtggcccaacagcggca
atggtcggtagcaagctacaagaattagcacaaaacacccaagttatctgtgtaacacat
ctaccacaggtcgcttgcaaaggtcatcaacagttatttgtcagtaaattaaccgatggc
gagtttacagaaacaaaagtaacggaactaagtgctaatggcagagtccaagaaattgct
cgcttattagcggggaataaaataacggataacagcttggctaatgctcaagagttactt
gccggttaa
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