Colwellia sp. PAMC 20917: A3Q34_05810
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Entry
A3Q34_05810 CDS
T04511
Name
(GenBank) tRNA pseudouridine synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coz03016
]
A3Q34_05810
Enzymes [BR:
coz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A3Q34_05810
Transfer RNA biogenesis [BR:
coz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3Q34_05810
Prokaryotic type
A3Q34_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOW76417
UniProt:
A0A1D8RTK4
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All DBs
Position
complement(1365043..1366077)
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AA seq
344 aa
AA seq
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MSKSLQYLYTQPNATGQLRSEMSDFKVFEKLPFEPCGEGEHLFIHLRKTGANTLVVAREL
AKYFKVKEGLVSYAGLKDRFAVTEQWFGIHLPGKAIYDLSNLAIEGVEVLSQQRHNKKLR
IGALSGNRFELVLRNVSNTDDVLRRWTAVSQFGVPNYFGEQRFGINGGNLERALELFQGK
KVKDKKKRGLYLSAARSEIFNQIISTRIERNQFESLQTGDVFMLSGTQSVFLADEIDATI
RQRFQEKDIDLTAALWGAGELMSQGESQQLEQQVADGYADFCQGLAKFGLKQERRRIRLS
LTEGSIKSVDDTITLSFFLPSGCYATTILRELISYQDMTERAVN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcattacaatatttatatacccaaccgaatgccactggccaacttcgtagt
gaaatgtctgattttaaggtctttgaaaaattaccttttgaaccttgcggcgaaggcgaa
catttatttattcacctgagaaaaactggcgccaatacgctagttgttgcccgagagttg
gctaaatactttaaggtaaaagaaggcttagtatcttatgccggcttaaaagacagattt
gctgttaccgagcagtggttcggtattcacctaccaggcaaagcgatttatgatttaagt
aacttagccatcgaaggtgttgaagttctttcccaacaacgtcataacaaaaaattacgc
atcggtgccttgtcaggtaatcgcttcgaattagtgttgcgtaatgtcagtaataccgat
gatgtcttacgccgctggactgcggttagccaatttggtgtgcctaactactttggtgaa
caacgctttggtattaatggcggcaaccttgaaagagcgttggagttatttcaaggtaaa
aaagtaaaagataaaaagaaacgtggcctttatttatcggcggctcgctcagaaatcttt
aatcaaataatcagtactcgtattgaaagaaatcagtttgaatctttacaaacgggtgat
gtttttatgttaagcggcacacagtcggtatttttggctgatgaaattgacgcaaccatt
cgtcaacgctttcaagaaaaagatatcgacttaacggcagcgctgtggggcgctggcgaa
ttaatgtcgcaaggcgaatcacaacagctagagcagcaggttgccgatggttacgctgac
ttttgccaaggtttagctaagtttggcttaaagcaagaacgacgtagaattaggttgtcg
ttaactgaaggcagtataaagtcggttgatgacaccataacattgagcttctttttacct
tctggttgttatgcaaccaccattttgcgtgaattaatcagttatcaagatatgacagag
cgagcggtaaactaa
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