Colwellia sp. PAMC 20917: A3Q34_06465
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Entry
A3Q34_06465 CDS
T04511
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz02020
Two-component system
coz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3Q34_06465
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A3Q34_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coz03021
]
A3Q34_06465
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
coz02035
]
A3Q34_06465
Transcription machinery [BR:
coz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3Q34_06465
Bacterial motility proteins [BR:
coz02035
]
Flagellar system
Flagellar assembly proteins
Stator
A3Q34_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
CT_C_D
GerE
Motif
Other DBs
NCBI-ProteinID:
AOW76532
LinkDB
All DBs
Position
complement(1515456..1516175)
Genome browser
AA seq
239 aa
AA seq
DB search
MVKPNAYSIQTDKSAIISQHTVLVKRIAYHLLARLPASVQVDDLIQSGMIGLLEASNNFD
HGKGASFETFAGIRIRGAMLDEIRRGDWTPRSVHKNSRMVSEAIKLLEASLGRDVTDIEV
AEKLDISLNDYHHILSEVSTGKIIGIEDLSTGADAISNMEDVNNNDPYDNFEKIVFKKSL
TACISTLPEREALVLSLYYDEELNLREIGQVLDVSESRVSQIHSQAMHRLKGRMQSWQS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaaccaaatgcttacagtattcaaactgataaatctgctataatttcgcagcat
acagttttagtgaaaagaatcgcttatcacctattagcaaggttgcctgcgagtgtgcag
gttgatgaccttattcagtcaggcatgataggcctgcttgaagcgtctaataattttgat
cacggcaaaggtgcaagttttgaaacctttgctggtatccgtatccgtggtgctatgctt
gatgaaatacgccgtggtgactggactccccgctctgttcataaaaatagccgcatggtc
agtgaagcgataaaattgcttgaagcaagtttaggtcgtgatgtaactgatattgaagtt
gctgaaaaacttgatatttcgttaaatgactaccatcatattctaagtgaggtcagtacc
ggtaaaataattggtattgaagacttaagtacgggggccgatgctatatcgaatatggaa
gatgtgaataataacgatccctatgataattttgaaaaaatagtttttaaaaaatcgtta
acagcatgcatttccactttacccgaacgcgaagctctagtactgtcactatattatgac
gaagaattaaaccttcgagaaattggtcaagtgcttgatgtaagtgagtcgcgtgttagc
caaattcacagtcaagcgatgcataggttaaaaggacgtatgcaatcttggcaaagttga
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