Colwellia sp. PAMC 20917: A3Q34_08220
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Entry
A3Q34_08220 CDS
T04511
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz00071
Fatty acid degradation
coz00280
Valine, leucine and isoleucine degradation
coz00310
Lysine degradation
coz00362
Benzoate degradation
coz00380
Tryptophan metabolism
coz00410
beta-Alanine metabolism
coz00640
Propanoate metabolism
coz00650
Butanoate metabolism
coz00907
Pinene, camphor and geraniol degradation
coz00930
Caprolactam degradation
coz01100
Metabolic pathways
coz01110
Biosynthesis of secondary metabolites
coz01120
Microbial metabolism in diverse environments
coz01200
Carbon metabolism
coz01212
Fatty acid metabolism
Module
coz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A3Q34_08220 (fadB)
00650 Butanoate metabolism
A3Q34_08220 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A3Q34_08220 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A3Q34_08220 (fadB)
00310 Lysine degradation
A3Q34_08220 (fadB)
00380 Tryptophan metabolism
A3Q34_08220 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A3Q34_08220 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A3Q34_08220 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A3Q34_08220 (fadB)
00930 Caprolactam degradation
A3Q34_08220 (fadB)
Enzymes [BR:
coz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A3Q34_08220 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A3Q34_08220 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A3Q34_08220 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A3Q34_08220 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
AOW76843
LinkDB
All DBs
Position
complement(1919463..1921631)
Genome browser
AA seq
722 aa
AA seq
DB search
MLFQGQNLSAELLNDGIVEFKFDAQGSVNKFDQQTFKEYIEVVAAINNCADAKGVLVTSG
KSNFIVGADITEFLTMFKLPEAELIPWIKGGSDVFDSFEDIKLPTIVALNGFALGGGCEM
SLACDYRIADTTCSIGLPEVKLGLIPGFGGTVRLPRIIGADNAVEWMSTGKAFKPEQAMA
VGLLDAVVAPEHLREAAINMLKQAMSGKLNWQAKRQQKLEALKLSPVESIMTFNTCKGMI
AAKAGKHYPAPMMMVKTIEAAALLGRTEAMLIENTNFAKLAKTDAATAQIGLFMADQVVK
GKAKKAAKMATKQVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDAALDLGLNTAAGI
LTKQVERGRMNIKTMAGVLNNITPTLSYDSVKDVDIVVEAVVENPKVKGMVLAEVESFLS
EDAILTSNTSTISIDLLAQSVKRPENFCGMHFFNPVNKMPLVEVIRGKATSEETVAAVVA
YAAKMGKSPIVVNDCPGFYINRVLFPYFAGFSQLMLEGVDFAAVDKIMEKQFGWPMGPAY
LLDVVGVDTADHCTGVMSSGFPTRMAKIDNDPVSTLYSNKRLGQKNGKGFYDYGQDKRGR
PTKVASADAYALFESTCADKKEFSSEDIIARLMIPMVNEVVRCLEEGVVDTAAEADMGLI
YGIGFPPFRGGAIRYLETLGLTNFITMADKYAHLGEIYQVTDGLREMAKSGKSYFNTDVK
TA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaaggtcaaaacctttctgccgaattactgaatgacggcattgttgaattt
aaattcgatgcacaaggctcagtgaataagtttgatcagcaaacttttaaagaatatatc
gaagtggttgctgctattaacaattgtgcagatgctaaaggcgtacttgtaacgtctgga
aaatctaactttattgttggtgcagacatcactgaatttttaacaatgtttaaacttcct
gaagcggaacttatcccttggatcaaaggcggctcagacgtttttgattcatttgaagac
attaagctaccaacaattgttgcacttaatggttttgctttaggtggcggttgtgaaatg
agcttagcttgtgactaccgtattgctgatacaacatgttcgataggtttacctgaagtt
aaattaggcctgattcctggtttcggtggcacagtgcgcttaccaagaattattggcgct
gataatgctgttgagtggatgtctacgggtaaagcgtttaagcctgaacaagcaatggct
gttggtttacttgacgcggttgttgcgccagaacatttacgcgaagccgctattaacatg
cttaaacaagcaatgtctggtaagttaaattggcaagctaaacgtcaacagaaacttgaa
gcgttaaagcttagccctgttgaatcaattatgacctttaatacctgtaaaggtatgatt
gccgctaaagcgggtaaacattaccctgcacctatgatgatggtaaaaactatcgaagct
gctgctttactcggtagaacagaagccatgcttattgagaatacaaactttgctaagctt
gctaaaactgatgcggctacggcgcaaattggtttgtttatggccgatcaagtcgttaaa
ggcaaagcaaaaaaagccgctaaaatggcgactaaacaagtgaataaagccgctgtgtta
ggcgcgggtattatgggcggtggtattgcttatcagtctgcttataaaggcacgccaatc
attatgaaagacattaatgatgcagcacttgatctaggcttaaatactgctgctggcatt
ttaaccaagcaagttgaacgcggtcgtatgaatattaagactatggctggcgtgttaaat
aacatcacaccaacccttagctacgatagtgttaaagatgttgatatcgtggttgaagcg
gtagtcgaaaaccctaaagtaaaaggtatggtccttgctgaagtagaaagctttctttct
gaagatgccattttaacctctaacacctcaacgatttctatcgatttgttagcgcaaagt
gtaaaacgtccagaaaacttctgtggtatgcatttctttaacccggtaaacaaaatgcca
ttggttgaagttattcgtggtaaagcaacttctgaagaaaccgttgcggctgttgttgct
tacgcggctaaaatgggtaaatcaccgattgttgttaacgattgtcctggcttttatatt
aaccgtgttttattcccatactttgctggctttagccaattaatgcttgaaggtgttgat
tttgctgctgttgataaaatcatggaaaaacaatttggttggccaatgggcccagcatac
ttacttgatgtggtgggtgttgataccgctgatcattgtacgggtgttatgtcatctggc
ttcccaacgcgtatggcaaaaattgataatgacccagtaagcactctatacagtaataaa
cgtcttggtcagaaaaatggcaaaggcttttatgattacggtcaagacaagcgtggtcgt
ccaacaaaagtagcttcagctgatgcttacgcattgtttgaaagtacctgtgcagacaaa
aaagaatttagtagtgaagacattattgctcgcttaatgatccctatggtcaatgaagtg
gtgcgttgtttagaagaaggtgttgttgatactgccgctgaagctgatatgggcttaatt
tacggtattggttttccaccgtttagaggtggtgcaattcgttatttagaaacgttaggt
ttaactaactttattaccatggctgataagtatgcgcatttaggtgaaatttatcaggta
actgatggattacgcgaaatggctaaatcaggtaaatcttatttcaacaccgacgtaaaa
acagcataa
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