Colwellia sp. PAMC 20917: A3Q34_09025
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Entry
A3Q34_09025 CDS
T04511
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3Q34_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coz03021
]
A3Q34_09025
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_09025
Enzymes [BR:
coz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3Q34_09025
Transcription machinery [BR:
coz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A3Q34_09025
DNA repair and recombination proteins [BR:
coz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A3Q34_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AOW76984
UniProt:
A0A1D8RV40
LinkDB
All DBs
Position
complement(2095072..2096061)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLRPRLVGIETISATRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAISLEGKNEAVITLTKSGEGPVTAADIQHDGD
VTIANPNHVICNLTGEGSISMRIKIEMGRGYVPASVRRDAEDEDRAIGRLLVDASFSPVV
RIAYDVDSARVEQRTDLDKLVLDMETNGTLDPEEAIRRASTILAEQLDAFVELRDIKEVE
PKEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattccttagaccgcgattggttggtattgaaaccattagc
gcgactcgtgctaaggtaactttagagccattagagcgtggttttggtcatactttaggt
aatgctttacgtcgcattcttctatcttcaatgccaggttgtgctgtaactgaagttgag
attgacggcgttctacacgaatacagtagtaaagagggtgtgcaagaagacatcatcgaa
atattgttgaaccttaagggattagctataagtttagaaggtaaaaacgaagctgttatt
actttaactaaatccggtgaaggccctgtaacggcagctgatatccaacatgacggagat
gtaacaatcgcaaatcctaatcatgtaatctgtaatttaacaggtgaaggttctatcagc
atgcgcatcaaaattgaaatgggacgtggttatgttcctgcttcagttagacgcgatgcc
gaggatgaagatcgtgcaatcggacgtttgttagttgatgcttcgttcagtccagttgta
agaattgcctacgatgttgactctgcccgagtagaacagcgtactgatttagacaaactt
gtacttgatatggaaaccaatggtacattggatccagaagaagctattcgtcgtgcttca
acaattttagctgaacagctagatgcgtttgtagaattgcgtgatattaaagaagtagag
ccaaaagaagagaaacctttatttgaccctattttgcttcgtccagttgatgatcttgaa
ttaacagttcgttcagcaaactgcttaaaagcagaagcaattcaatacattggcgattta
gtacagcgtgcagaagttgagcttcttaaaacacctaatttaggtaagaagtctttaaca
gaaatcaaagacgttttggcgtctcgtggtttatctttaggtatgcgccttgaaaattgg
ccgcctgaaagcatcgctgataacgactaa
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