Colwellia sp. PAMC 20917: A3Q34_09240
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Entry
A3Q34_09240 CDS
T04511
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz02024
Quorum sensing
coz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3Q34_09240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3Q34_09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coz03019
]
A3Q34_09240
03036 Chromosome and associated proteins [BR:
coz03036
]
A3Q34_09240
Messenger RNA biogenesis [BR:
coz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A3Q34_09240
Chromosome and associated proteins [BR:
coz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
A3Q34_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AOW77024
LinkDB
All DBs
Position
complement(2129733..2129990)
Genome browser
AA seq
85 aa
AA seq
DB search
MAKGQSLQDPFLNALRRDRIPVAIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRAVSTMPAPQTGDYSQEQQD
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggggcaatctttacaagacccatttttgaatgctttacgacgtgatcgcatt
ccggtagcaatatatttagttaatggcattaaactacaagggcaagtagagtcctttgat
caatttgttattttacttaaaaatacagtgagtcaaatggtctataaacacgccatttct
actgttgttccttcaagggcagtttctacgatgccagcaccacaaactggtgattatagt
caggaacagcaagattaa
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