Colwellia sp. PAMC 20917: A3Q34_10755
Help
Entry
A3Q34_10755 CDS
T04511
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz03420
Nucleotide excision repair
coz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3Q34_10755 (uvrD)
03430 Mismatch repair
A3Q34_10755 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_10755 (uvrD)
Enzymes [BR:
coz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q34_10755 (uvrD)
DNA repair and recombination proteins [BR:
coz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3Q34_10755 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A3Q34_10755 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
AAA_12
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AOW77293
LinkDB
All DBs
Position
2490709..2492883
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSELLESLNEKQRDVVAAPLQNMLVLAGAGSGKTRVLVQRIAWLMQVENASSHSILAV
TFTNKAAAEMRVRVEKTVEGNVHGMWVGTFHGLAHRLLRMHFQEAKLPQNFQVLDSDDQL
RLVKRIVRSLGIDEKRWPPKQMQWYINGKKDEGIRPQHIEVYDDPTEQTFVKVYQGYQEA
CDRAGLVDFAELLLRAHELWLNNPVLLAHYQQRFKHILVDEFQDTNAIQYAWLNILGNAS
SKVMIVGDDDQSIYGWRGAKIENIQRFLNEFDDTKTIRLEQNYRSTANILNAANKLIANN
NNRLGKKLWTEDEAGEKISIYTAFNEIDEARFIAGRITDWRKEGSLDDVAILYRSNAQSR
LLEEALLQSRLPYRIYGGQRFFERLEIKDALAYLRLLNNRDDDAAFERIINTPTRGVGNT
SLSLIRDAARSLEMTLWQACQFMLKNDELKGRSAKVIQNFINIINTLEDDSSHLDLDQQA
NYVIQHSGLKAMYQAEKGERAEARIENLNELVTACQTFEADPELIEEQTKLTSFLTHAAL
EAGESQADDYEPAVQLMTMHSAKGLEFPLVFIAGLEEGMFPSQKSVEEIGRLEEERRLCY
VGMTRAMNKLYLCHAESRRLYGQEKFHKASRFLRELPPECTEEIRLQNQVTRPSTKGKFS
STFTLETFENSGFSLGQSVVHAKFGEGVVLNYEGSGAQSRIQVNFAGVGSKWLVVAYANL
QAIV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactacttgagtcactcaatgaaaaacaacgagatgttgtcgccgct
ccactacaaaatatgttggtattagctggcgcaggaagtggtaaaactcgggtgttagtg
caacgtattgcctggttaatgcaagttgaaaacgcctcttctcatagtattttagccgtt
acttttaccaataaagccgcagcagaaatgcgagtgcgtgttgaaaaaacagttgagggt
aatgttcatggtatgtgggtcggtactttccatggtttagcccatcgcttactccgtatg
cattttcaagaagctaaattaccacagaattttcaagtgcttgattcagatgatcaactg
cgcttagttaagcgcatcgtacgttcgttaggtattgacgaaaaacgttggccacccaag
cagatgcagtggtatatcaatggaaaaaaagatgaaggcattcgtccacagcacatagag
gtttacgatgatcccactgagcaaacatttgttaaagtttatcaaggatatcaagaagct
tgtgatcgagccggtttagtcgattttgccgagttattattgcgtgcccatgaactttgg
ttgaataaccccgttttgcttgcccattatcagcaacgctttaaacatattttagtcgac
gaatttcaagacaccaatgccattcaatacgcctggttaaatattctgggtaacgcatcg
agtaaggtgatgattgttggtgatgacgaccaatcaatttacggctggcgtggcgcaaaa
attgaaaatattcagcgttttcttaatgaatttgacgacacgaaaactatacgtttagaa
cagaattaccgctccacagctaatattcttaatgcggctaataaacttatcgccaataat
aataaccgcttaggtaaaaagttgtggaccgaagatgaagcgggcgaaaaaatatctatt
tatacggcattcaacgaaatagacgaagctcgctttattgccggtcgaattacggattgg
cgtaaagaaggcagcttagatgatgtcgctattttatatcgcagtaatgcgcaatctcgt
ttactcgaagaagcgctcttgcagagtcgtttaccttatcgtatttacggtggtcaacgt
ttctttgaacgtttagagattaaggatgcacttgcttacttacgcttattaaataatcgc
gatgatgatgcggcttttgaacgtattattaataccccaacacgtggcgttggtaatact
agcctatcgttaatacgtgacgctgcgcgcagtttagaaatgacattatggcaagcgtgt
caatttatgctaaaaaatgatgaattgaaaggacgaagtgcgaaagtcattcaaaatttt
attaatattatcaacactctcgaagatgactctagccaccttgacctcgaccaacaggcc
aactatgttattcagcacagtggtttaaaagccatgtatcaagctgaaaaaggtgaacgt
gccgaggcaagaatagaaaacttaaatgagcttgttaccgcttgtcagaccttcgaagcg
gacccagagttaatagaagaacaaacaaagctcacctcatttttaacccatgctgccctt
gaggctggcgagtcacaagccgatgattatgaacccgctgtgcagttaatgactatgcac
tctgcgaaaggtttagagtttccattagtgtttattgccggcttagaggagggaatgttt
ccctcacaaaaatcagtagaagaaataggacgtttagaagaggaaaggcgtttatgttac
gtcggcatgacacgtgctatgaataagctatacttgtgtcatgcagaaagccgccgactt
tatggacaagaaaaatttcataaagccagtcgttttttacgggaattacctcctgagtgt
accgaagaaataagattacaaaatcaagtgactcgtccatcaactaaaggtaagttttca
tcgacctttactctggaaacgtttgagaacagcggctttagtttaggacagtcagttgtt
catgctaaatttggtgaaggcgttgtcttaaattatgaaggttcaggagctcaaagccgt
attcaagttaattttgctggtgtaggtagtaaatggctggtggtcgcctatgctaactta
caagccatcgtttaa
DBGET
integrated database retrieval system
