Colwellia sp. PAMC 20917: A3Q34_11160
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Entry
A3Q34_11160 CDS
T04511
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz03030
DNA replication
coz03430
Mismatch repair
coz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3Q34_11160
03430 Mismatch repair
A3Q34_11160
03440 Homologous recombination
A3Q34_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coz03032
]
A3Q34_11160
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_11160
Enzymes [BR:
coz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3Q34_11160
DNA replication proteins [BR:
coz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3Q34_11160
DNA repair and recombination proteins [BR:
coz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3Q34_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AOW77369
LinkDB
All DBs
Position
2585766..2586470
Genome browser
AA seq
234 aa
AA seq
DB search
MLSNQPLFYWLLGYEAKRKRAWARAPEGALKDFLAVSFPEPDTPLNEIEILSVDFETTGL
HAINDKLLSVGFIGIKQQQISLKDSYHQIIKTKDDLSADNVIIHQITDQQKEQGAPLKEV
VEALLKALAGKVMLVHFARIERQFLQQACLELYGVAPPFPMIDTLMIAKRQLDKKDVAYD
PSELRLSTLRHAHGLPNHFAHNALNDAIATAELLMVQVSEMSDNNSLKLHDLLL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcaatcaacccttgttttattggttactcggttatgaagctaaacgaaaacgt
gcttgggcgcgagcgccagaaggagccttaaaagactttcttgctgtcagttttcctgaa
cctgatacgccattaaatgagattgaaattttgtcggttgattttgaaaccactggcctt
catgccattaacgataagttactgagtgttggctttattggcataaaacagcagcaaata
tcattaaaagacagctaccatcaaatcatcaaaacgaaggatgatcttagcgcagataac
gttattattcatcaaataactgatcagcaaaaagaacaaggcgcgccattaaaagaggtg
gttgaagccttactcaaagctttggctggaaaagtaatgttggtacattttgctcgtatt
gaaagacaattcttgcagcaagcttgtttggaactttatggcgtagcgccaccttttccg
atgatagataccctaatgatagcaaagcgtcaacttgataaaaaggatgtcgcttacgac
ccttcagaattaagattgtcaactttgcgccacgctcatggcttgccaaatcattttgcc
cataacgctttaaatgacgctatagctacggctgaactgttaatggtacaagtcagtgaa
atgtctgataacaactcacttaaattgcacgatttattattgtaa
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