Colwellia sp. PAMC 20917: A3Q34_12025
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Entry
A3Q34_12025 CDS
T04511
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coz03016
]
A3Q34_12025
Enzymes [BR:
coz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
A3Q34_12025
Transfer RNA biogenesis [BR:
coz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
A3Q34_12025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_4
MTS
Methyltransf_12
Methyltransf_11
PrmA
Cons_hypoth95
Methyltransf_ANTKMT
TPMT
TetR_C_8
pP_pnuc_1
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AOW77522
LinkDB
All DBs
Position
complement(2787689..2788786)
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AA seq
365 aa
AA seq
DB search
MFSHIAPQFYDKQLDNKQDDIAKLFSDFDLPNFDVFRSEPLNYRLRAEFRVWHDNDDLFY
IMFNSETKEKYRVYTFPVASKLINQAMKALLDEIKDKPSLRHRLFQVDFLSTLSGELLIS
LLYHRQLDEEWLTEAATLKTTLSAIAPVDIIGRAKKQKFILDKDYVTEKLTVGDKTYIYE
QVENSFTQPNGHVNEQMLLWAKQGTQNIGGDLIELYCGNGNFSIALAENFDRVLGTEISK
TSVKSAQNNITANQLTNVDIIRMSSEDFSQAMNGERVFRRLEGFDLKSYNYDTVLVDPPR
AGLDPDSVELVSRFERIVYISCNPETLKENLVELIKTHNIEKFALFDQFPYTHHVETGVI
LSRKK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcacattgcaccacaattttatgataaacaacttgataacaaacaggatgat
atcgctaaattgtttagtgattttgacttaccaaattttgatgtatttcgatcagagcct
ttaaactatagattacgagcagaatttagagtttggcatgacaatgatgacttattttat
attatgtttaatagtgaaacgaaagaaaagtatcgcgtctacactttcccggttgccagt
aaactcattaatcaagctatgaaagccttgcttgacgaaattaaagataaaccgtcactt
cgtcatcgattatttcaagtcgattttttatcaacgctcagtggcgagcttttaataagc
ttgttgtatcacagacaattagatgaagaatggctaactgaagcggcaacactaaaaaca
accctttcagcaatagcccctgttgatattattggccgtgctaaaaaacaaaaatttatc
ctcgataaagattatgtcactgagaagttaactgttggcgataaaacttatatctacgag
caagtagaaaatagttttacacagcctaatgggcacgttaatgagcaaatgctactttgg
gcaaagcaaggcacacaaaatatcggtggtgacttaatcgaactctattgtggtaatggt
aactttagtatcgcactcgctgaaaactttgatcgggtattaggtactgaaatatcgaag
acatcagtaaaatctgcacaaaataatatcaccgcaaaccagttaaccaatgttgatata
ataagaatgtccagtgaagattttagtcaagcgatgaatggtgagcgagtatttcgtcgt
ctagaaggtttcgatcttaaaagctataattacgataccgtattagttgatccaccaaga
gctggccttgaccctgacagcgttgagttagtcagccgatttgaacgtattgtttatatc
tcatgtaatcctgagacattaaaagaaaacttagttgaactaataaagacacacaatatt
gaaaaatttgcgttatttgatcagtttccatatacccaccatgttgaaacaggtgtgata
ctttcacgtaaaaagtaa
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