Colwellia sp. PAMC 20917: A3Q34_13345
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Entry
A3Q34_13345 CDS
T04511
Name
(GenBank) FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_13345
Enzymes [BR:
coz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3Q34_13345
DNA repair and recombination proteins [BR:
coz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3Q34_13345
Prokaryotic type
A3Q34_13345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOW79121
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Position
3094042..3095568
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AA seq
508 aa
AA seq
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MNTAVNVVWLKRDLRLSDHQPLVQAIKSGQTLLYYVFEPLLINDPHYDERHWRFVWQSIA
DMNSQLAAFNSRVYLYFGDAIAGLIEINNVFKISGLFSHEEVGLLSTFERDKSVQQWCQA
QDIVWNESQFGAVSRGKKNRIDWDKHWHQVMKAPLEQAKLSDDVLASCTLIDKLFFCSFP
ISWSITDDFMLKGGELWAQRTLQSFLKGRGKGYHFDISKPQASRKSCSRLSPYLAWGNIS
LREFYQTILITRSERGWKRPIDALASRLHWHCHFIQKFESEHQMQWRPVNKAYNDLMYPD
IHCGLSVEERLDKWKTAQTGYPLVDACMRCLEQTGYINFRMRAMLVSFLCHHLLVDWRLG
VTHLAQLFLDFEPGIHYPQFQMQSGVTGTNIIRVYNPVKQSLEKDSHGEFLRKWLPELVE
LPNEVIHTPWLLSPMEQQLYQCQLGDDYPSPMVDINETGKIARDLLWGFRQRFTTKKEGQ
RIVAKHVRGNKKISKAKKPQQLKIAESD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgcggtaaatgttgtttggctgaaacgtgatttacggctcagtgatcatcaa
cctttagtgcaagcgattaaatcgggtcaaaccttgctttactacgtctttgaaccgcta
cttataaatgatcctcattatgatgagcggcattggcgttttgtttggcaatctattgct
gatatgaatagtcagctagccgcttttaattcacgggtatatttgtattttggtgatgca
atagcgggcttaattgaaatcaataacgtctttaaaataagcgggttgtttagccacgaa
gaagtgggtttactatcgacctttgagagagataaatcggtacaacagtggtgccaagca
caagatatagtttggaatgagagtcaatttggtgcagtaagtcgtggcaaaaaaaataga
attgattgggacaaacactggcaccaagtgatgaaagccccgctggaacaagccaaactg
tcggatgatgttctagcgagttgcacattaatagataagctatttttctgcagttttcca
atatcatggtcaataacggatgactttatgcttaaaggtggtgagctttgggcgcaaaga
accctgcaatccttcttaaagggtcgtggtaaggggtatcattttgatatctctaaaccg
caagcaagtcgtaaaagttgctctcggttgtcaccttatctagcctggggcaatataagt
ttaagagagttctatcaaactattttgataacaagatcagagcggggttggaaacgacca
atagacgcgctggcttctcggctacattggcattgtcactttattcaaaaatttgaaagt
gaacatcaaatgcaatggcgacccgtgaataaagcctataatgacttaatgtatccagat
attcattgtggactgagtgttgaagaacgactagataaatggaaaactgcgcaaacaggt
tatccattagttgacgcttgtatgcgttgtttagagcaaactggctatataaattttcgt
atgcgggcgatgctagtgagttttttatgccatcatttactggtggattggcgattaggc
gttacccatttagcacaattatttcttgattttgaacctggcattcattacccacaattt
caaatgcagtctggtgttactggtactaatatcataagggtttataacccggttaagcaa
tcattagagaaagatagtcatggtgaattcctgagaaaatggttacctgaattagttgag
ttacccaatgaagttattcatacaccctggttattgtcacccatggaacaacagctttat
caatgccaattaggtgatgattatccatctcctatggttgatatcaacgaaacaggcaag
atcgctcgcgatttactgtggggctttcgtcaacgatttaccaccaaaaaagaagggcaa
cgtattgtagctaaacatgttagaggtaataaaaaaatatccaaagctaaaaaacctcaa
cagttaaaaattgcagaaagtgactaa
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