Colwellia sp. PAMC 20917: A3Q34_15590
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Entry
A3Q34_15590 CDS
T04511
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coz03016
]
A3Q34_15590 (truB)
Enzymes [BR:
coz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A3Q34_15590 (truB)
Transfer RNA biogenesis [BR:
coz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3Q34_15590 (truB)
Prokaryotic type
A3Q34_15590 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AOW78137
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All DBs
Position
3634281..3635243
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AA seq
320 aa
AA seq
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MAKRRKGRPINGVILLDKPYDMSSNSALQKVKRIFFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGVRTTTSDADGEVVAEKRVDVSSEQLAIALESFRGTTQQ
IPSMYSALKYKGQPLYKYAREGVEVPRESRDITVFRLDLLRFEGDEVDLDIHVSKGTYIR
TIIDDLGELLGCGAHVANLRRSAVGNYPTDKMVTLEQLQALVAQAEEQEIAPSKLLDPLL
LPMTTACDGIPEVFIDDMSANFLRHGNPVQAANVPAEGLVQVFVGDNINDGEFIGVGHID
DNGLIAPKRIVVLDEFLKTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgcagaaaaggtcgcccaattaatggggtgatcctacttgataaaccctat
gacatgtcatcgaacagtgctttacaaaaagttaagcgtatcttctttgcacagaaagcc
ggccatactggggcattagatccacttgctaccggtatgttgccgatttgtttaggtgaa
gggactaagttttctcaatttttactggataccgataaaacctatcaagtaacagcaaaa
ttgggtgtgcgcaccacaaccagtgacgctgacggtgaagttgttgcggaaaaacgggtt
gatgtttcaagtgagcaattagcaatagcacttgagtcttttcgcggtaccacacagcaa
attccttccatgtactcagcgttaaaatacaaaggccagcctttatataaatatgcgcga
gaaggtgttgaagtccctcgtgaatcacgagacattacggtttttcgtttagacttatta
cgctttgaaggtgacgaagttgatttagatattcatgtatctaaaggcacctatattcgt
actatcatcgacgatttaggtgaactgcttggttgtggcgcacatgttgctaatttacgc
agaagtgccgtgggaaattatccgacagataaaatggtaacactggaacaattacaagca
ttagtggcacaagcagaagaacaagagatagcgccatctaagttgcttgaccctttatta
ttgccgatgacgacagcctgtgatggtatccctgaggtttttatcgatgatatgtctgct
aattttttgcgccatggtaatccagtacaagcagctaatgttccggctgaaggtttagtg
caggtttttgttggagacaatatcaatgatggagagtttattggtgttggtcatatagac
gacaacggtttaattgcacctaaacgcattgttgttttagacgaatttttgaaaacgctg
taa
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