Colwellia sp. PAMC 20917: A3Q34_15600
Help
Entry
A3Q34_15600 CDS
T04511
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3Q34_15600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coz03019
]
A3Q34_15600
03016 Transfer RNA biogenesis [BR:
coz03016
]
A3Q34_15600
Enzymes [BR:
coz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A3Q34_15600
Messenger RNA biogenesis [BR:
coz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A3Q34_15600
Transfer RNA biogenesis [BR:
coz03016
]
Prokaryotic type
tRNA degradation factors
A3Q34_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
aRib
KH_SLS1_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AOW78139
LinkDB
All DBs
Position
3636107..3638224
Genome browser
AA seq
705 aa
AA seq
DB search
MFNTVTKTFEFGQHTVTLETGAIARQATCAVMASMDDTCVLVSVVGKKEAKPGQDFFPLT
VNYQERTYAAGKIPGGFFKREGRPSEEETLICRLIDRPIRPLFPDGFTNEVQVVITVVSA
NPEIAPDIISLLGTSAALAISGMPFSGPVGAARVGYTDGKYILNPLQSELETSKLNLVVS
GTDSAVLMVESEADILSEEVMLGAVMYGHEQMQTAITAIKEMAAEVNNPKWDWVAPVKNA
DLIAKIAELSEAQVNEAYQITEKAVRYEKIKEIRDGVVETLLASDADLNVQEAKDLFHDL
EKTVVRGRITKGMPRIDGRDPEMIRALDVMTGVLPRTHGSAVFTRGETQALVTATLGTQR
DAQRLDTIMGEKTDAFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGMLAVMPSLEE
FPYAVRIVSEITESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEGDDFVVLSD
ILGDEDHLGDMDFKVAGTTGGITALQMDIKIEGITKEIMQLALNQAKAARTHILSVMDEA
ISGHRDDISQFAPRIHTIKVSQDKIRDIIGKGGATIRMLTEETGTTIEIDDDGTVKIAAT
NGEQAEDAINRIKALTAEIEVGTIYQGKVVRIVDFGAFVNVLPGKDGLVHISQISDERVN
AVSDVLTEGQEVTVKVLEVDRQGRVRLSIKEATEKKEAPVADAAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatactgttacaaaaacatttgaattcggtcaacataccgttactttagaaaca
ggtgctatcgcacgtcaggcaacttgtgctgttatggcaagcatggacgatacgtgtgta
ttagtgtctgttgttggtaagaaagaagcaaaaccaggacaagatttttttccattaacg
gttaactaccaagagcgtacatacgcagccggtaaaatcccaggtggtttctttaaacgt
gaaggccgtccttctgaagaagaaacattaatctgtcgtttgattgaccgtccaattcgt
ccacttttcccagatggctttactaacgaagttcaagttgttattacggttgtttctgct
aacccagaaattgcccctgacatcatttctttattaggtacatctgcagctctagctatt
tcaggtatgccatttagtggtcctgttggcgcagcacgtgttggttatactgacggcaaa
tacattcttaacccattacaatctgaattagaaacgtctaagttaaacttagttgtttca
ggtactgattctgcggtactaatggttgagtctgaagctgatattttatctgaagaagtt
atgcttggcgctgttatgtatggccatgagcaaatgcaaacggctatcacagcaattaaa
gaaatggctgctgaagttaacaatcctaaatgggattgggttgcaccagttaagaatgct
gaccttattgctaaaattgcagaattaagtgaagcacaagttaacgaagcttaccaaatc
actgaaaaagctgttcgttacgaaaaaatcaaagaaatccgcgatggtgttgttgaaaca
ttattagcaagtgacgcagatcttaacgttcaagaagcgaaagatttattccatgactta
gaaaaaactgttgttcgtggtcgtatcactaaaggcatgcctcgcatcgatggtcgtgat
cctgaaatgatccgtgccctagacgtaatgacaggcgtattaccaagaactcacggttct
gcggtatttactcgtggtgaaacacaagcattagttacagctactttaggtacacaacgt
gatgcacagcgtcttgatacgattatgggtgagaagactgacgcatttatgcttcattat
aactttcctccatactgtgttggtgaaacaggttttgttggttctccaaaacgtcgtgaa
atcggccatggccgtttagcaaaacgcggtatgttagctgttatgccttcacttgaagaa
ttcccatatgcggtgcgtattgtttctgaaattacagaatcaaatggttcatcttcaatg
gcttctgtttgtggtgcttcattagcattaatggatgctggtgtgccaattaaagcttct
gttgctggtattgcaatgggcttagttaaagaaggcgacgattttgttgttctttcagac
attttaggtgatgaagatcacttaggtgacatggactttaaagtagcgggtactaccggt
ggtattactgcacttcaaatggacattaaaattgaaggtatcactaaagaaatcatgcaa
cttgctttaaaccaagcaaaagctgcacgtactcatatcttatctgtaatggatgaagct
atttctggtcaccgtgatgatatttcacagtttgcaccacgcattcataccatcaaagtt
agccaagataaaattcgtgacatcattggtaaaggtggtgctactatccgcatgcttacc
gaagaaacaggtacaactatcgagattgatgacgatggtactgttaaaattgctgcaact
aatggtgagcaagctgaagatgcgattaatcgtattaaagcattaacggctgaaattgaa
gtaggtacaatttaccaaggtaaagtagtacgtatcgttgattttggtgcctttgttaac
gtacttccgggtaaagatggtttagttcacatctctcaaatctctgacgaacgtgttaat
gctgtaagtgacgtattaactgaaggccaggaagttacggttaaagtacttgaagtcgac
cgtcaaggccgtgtacgtttaagtattaaagaagcaactgagaaaaaagaagcaccagta
gctgacgctgctgaatag
DBGET
integrated database retrieval system
