Colwellia sp. PAMC 20917: A3Q34_16850
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Entry
A3Q34_16850 CDS
T04511
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
coz
Colwellia sp. PAMC 20917
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coz03009
]
A3Q34_16850 (rimO)
Enzymes [BR:
coz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A3Q34_16850 (rimO)
Ribosome biogenesis [BR:
coz03009
]
Prokaryotic type
ribosomal protein modification factors
A3Q34_16850 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
AcnX
Motif
Other DBs
NCBI-ProteinID:
AOW78361
UniProt:
A0A1D8RZ29
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All DBs
Position
3939677..3941131
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AA seq
484 aa
AA seq
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MTVEQFDPQATKKSSNSAESQTTTLDIPSKMIEEQKNSQQPSKAAKIGFVSLGCPKNLVD
SERILTQLRTEGYDVTNSYDDAELVIVNTCGFIDSAVQESLDTIGEALAANGKVLVTGCL
GVKKDEIIELHPNVLGVTGPHAYDEVLTQVHKHVAKPVHNPFIDLVPPQGVKLTPKHYAY
LKISEGCNHRCTFCIIPSMRGDLDSRPIGDVLGEAKRLVDAGVKELLVISQDTSAYGVDV
KHKTDFWDGMPVKTHMQQLCEELAKRGVWIRLHYVYPYPHVDKIIPLMAEGKILPYLDIP
FQHANKRILKLMKRPGSSDRVLERIAKWREICPELVIRSTFIVGFPGETEEEFEELLEFL
EEAQLDRVGCFKYSPVEGATANALPDHNSDEVMEDRLQRFMAVQARISAEKLQARIGQEY
LILVDEVSALGIVGRSYMDAPEVDGKVYLSDDYDAKPGDLMWVQIIHADEHDVWGVRVDD
EAED
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagaacaattcgacccacaagcaactaaaaaaagcagtaattcagccgagagc
cagacaaccacattagacattccgtccaagatgattgaagagcaaaagaatagtcaacag
ccctctaaagcggctaaaatcggatttgtttcattgggctgcccaaaaaatcttgttgat
agcgagcgcatccttactcagcttcgcactgaaggttacgatgtcaccaatagctacgat
gatgctgaattagtgattgtaaatacctgtggtttcattgattcagccgttcaagaatct
ttagatacaattggtgaagcacttgctgccaacggtaaagtattggtgactggctgttta
ggcgttaagaaagacgaaatcatcgaattacatcctaatgttttaggtgttacgggacct
catgcttacgatgaagtgttaacacaagtacacaaacatgtagccaagcctgttcataac
ccttttattgatttagtaccgccacaaggcgttaaacttacccctaagcattacgcgtat
ttaaaaatatcagaagggtgtaaccaccgttgtacgttctgtattattccttcaatgcga
ggcgacttagactctcgtcctattggcgatgtcttaggtgaagccaaacgtttagttgat
gctggcgttaaagaattgttagttatatctcaagatacttcggcttacggtgttgatgtt
aaacacaaaactgatttttgggatggtatgccggttaagactcacatgcagcagttatgt
gaagaattagccaagcggggcgtttggatacgtctccattatgtttacccgtatccgcat
gttgataaaataattcctcttatggcagaaggtaaaatactaccgtatttagatattcct
tttcagcatgccaataaacgtatcttaaaattaatgaagcgtcctggtagctctgaccgt
gtattagagcgtatagctaaatggcgtgagatttgccctgaattagttattcgttcaacc
tttattgttggcttccccggtgaaacagaagaagaatttgaagaattattagaattttta
gaagaagcacaattagaccgcgtcggttgttttaaatactcacctgttgaaggtgctacg
gctaatgctttacctgatcataattcagacgaagttatggaagatcgtttacaacgtttt
atggcagtacaagcgagaataagcgcggaaaaactacaagcacgtattggtcaagaatat
ttaattcttgttgatgaagtgagtgcccttggtattgtcgggcgttcttatatggatgcg
ccagaagttgacggtaaagtgtatttgtctgatgattatgacgctaagccaggcgaccta
atgtgggtccaaattattcatgccgacgagcatgatgtttggggcgttagagttgacgac
gaagctgaagattaa
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