Colwellia sp. PAMC 20917: A3Q34_18720
Help
Entry
A3Q34_18720 CDS
T04511
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
coz
Colwellia sp. PAMC 20917
Pathway
coz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q34_18720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coz03400
]
A3Q34_18720
Enzymes [BR:
coz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A3Q34_18720
DNA repair and recombination proteins [BR:
coz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q34_18720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOW78690
UniProt:
A0A1D8S005
LinkDB
All DBs
Position
4382817..4386257
Genome browser
AA seq
1146 aa
AA seq
DB search
MENLLALLDKIQQVSPLPIFSQEMIVVQNAGMQHWLNMSLAQQRGISMNISYALPSQFLW
KLVRSMASDEDVPDQSPFSREVLSWRIDQLLGSAVVIQDPDFSSASQYWLGASIDEDNLA
NRSIGESEKIKQDKPRVFTEQQTLKRYQLACQLADLYEQYLIFRPQWINDWHQGKSSQSF
VNKEQALAVEKWQAKLWQLLTQEQSYNPLELVNQAIKNIVSKKHLLPPRLSFFGINAMAP
MWLSFIEAISEHLDVHFFHLNPCFDYWGDIQSEKQAINLLSKWVVGHDDITVNVGNPLLA
NLGQQGREFMALLNDYSTVNIEVFDAVEQSDGAENISVLQQVQQDILTLTDQRSTAKNQQ
DNSIVFTSAHSALREVQGLHDWLLHQFNDDKTLTPKDVLVMCPQVEQYAPYVSAVFARGW
QDLADKIPPLPCSIADRVSKDAEPVVAAFTQLLSLPDSRFQVSQIIGMLRLPAMQNKFSI
SLEELDKMSAWLEQACVHWGVDQQHKQEVLHSLEVNNAFTWQQGLSRLMRGFAFSDRSIY
VDEQLYLPNVEGNDAILLGKLMLIIEQLQHFSQQLGQDKSANQWQQFLLTMLNSLFEVTD
EMAFNVIDQAISSLAEYCQHANYQPNISLSVVRDFLTNHFSQPDPGRQFMVGQITFCSML
PMRSIPFKVIAILGLNDGEFPRQRQPLGFDLMASSKSELGDRSRRGDDRYLFLEAIISAR
QSLYLSYQGRNIRNNNEKQPSVVLKELMEYLEAGYGWQLHNAEAGNDENGNGDQSSDIKQ
LPMQAFSEHNYLGKFKSFDPNWLKLKSAKKIQQSDALLLPLSIIVNDDPQVVDINELIRF
FQHPAKAFAQRHLQLFFESHETQLDDTEPFSENFLQSYLLRQQLLALYLVGSSEDEISSA
VSAAGVSGVFPDLPSTHDSLERWRDDSETFSEFIQSQSQLTNDSLPITFINTELDVVLSD
NSHFTLSANFPVQADSLMFYRSSSAKGKDLFGLYLHQIIMQCWQANTANLNAAHLTEEQN
MLAQVNVTKGFYFDTKNQKPTQYRFSKIDNAQAQLAFIVETYLKGQQQALLLNTELIEKF
FKAKAFAQSSFEKLWSDSGSMLSVVKPLGQDPYMHYFWQQCPEFSEYQSTFTALYQPMWQ
AQEQIK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttattagcacttctcgataaaatccaacaggtttcaccacttcctattttc
agccaagaaatgattgttgtgcaaaatgccggtatgcagcattggcttaatatgtcgtta
gcccagcaacgcggcatcagcatgaatatcagttatgccttgccgtcacagtttttatgg
aaactggtcagaagcatggccagtgatgaagatgtacccgaccaatcgccgttctctcgt
gaagtactttcatggcgaatagatcaattactcggcagtgctgttgttatacaagaccct
gatttttccagtgcaagccaatactggttaggggcgtctattgatgaagataatttagcc
aatagatctattggtgaatctgaaaaaataaagcaagacaagccaagggtctttaccgaa
cagcaaaccttgaagcgctatcaacttgcttgtcaattagctgatttatatgagcaatat
ttgatttttaggccgcagtggattaatgattggcatcaaggtaaaagcagccaaagtttt
gttaacaaagaacaagcgttagccgttgaaaaatggcaagcaaaattatggcaattgtta
acgcaagagcaaagttataatccacttgagttagtcaatcaagccattaaaaatattgtt
agcaaaaagcacttattgccaccgcgcttatctttttttggtatcaatgcgatggcgcca
atgtggttatcatttattgaagcgataagtgaacatcttgatgtacattttttccatctt
aatccctgttttgattattggggcgatatacaatcagaaaaacaagcgattaatttactc
tcaaaatgggtcgtcgggcacgatgatattaccgtaaatgttggtaaccctttgctggct
aatttaggtcaacagggccgcgagtttatggccttgcttaacgattattcaacggtaaat
attgaagtttttgatgcggttgaacaaagtgatggagcagaaaatatatcggttttgcag
caagttcaacaagacattttgacgttaactgatcaaagaagcaccgccaaaaaccaacaa
gacaactcgattgtttttaccagcgcacacagcgcattacgtgaagtacaaggcttgcac
gactggttactgcatcagttcaatgatgataaaaccttaacacccaaagatgtattagtg
atgtgcccacaagttgaacaatatgccccttatgttagtgctgtatttgcacgaggctgg
caagacttagcggataaaatcccgccattaccttgttctattgccgaccgggtcagcaaa
gatgcagagcccgttgtggccgcttttacccaattactgagtttacccgatagtcgtttt
caagtttcccaaatcattggcatgttacgtttacccgccatgcaaaataaattttcaatc
agtcttgaagagctagacaaaatgtctgcttggcttgaacaagcttgtgtgcactggggc
gttgaccagcaacataagcaagaggtcttgcatagcctcgaagttaataatgcttttacc
tggcaacaaggtttgtcacgattaatgcgtggctttgctttttctgaccgttcaatatat
gtagatgaacaactatatttaccgaatgtcgagggcaacgatgccattttattgggtaag
ttaatgttgattatcgagcaattacagcatttttcccaacaacttggccaagataaatca
gccaatcagtggcaacaatttttattaacgatgttaaatagtctttttgaagtaaccgac
gaaatggcctttaacgttattgaccaagcgatcagctctttggccgaatactgtcaacat
gccaattatcagcccaatatcagtttgagtgtggtacgtgactttctgacaaatcatttt
agtcagcccgatcctggtcggcaatttatggttgggcagataaccttttgctcgatgtta
ccgatgcgcagtattccctttaaagtgattgctattttaggcttgaacgatggcgaattt
cctcgacaacgccaaccgctaggttttgatcttatggcgagtagtaaaagcgaattgggt
gacagatcgcgccgtggtgacgacagatacttgtttttagaagccattatatcggcgcga
cagtcattatatttaagctatcaaggccgtaatattcgcaataataatgaaaagcagcca
tcggttgtcctcaaagaattgatggaatatttagaagcaggctatggctggcagttacat
aatgctgaggctggcaatgacgaaaatggtaatggtgatcaatcttcagatattaaacaa
ttacccatgcaagcattcagcgagcataactatttaggcaaatttaaaagctttgaccct
aattggttgaaacttaaatcagctaaaaaaatccaacaaagcgatgctttattgttacca
ctttcgatcattgttaatgatgatcctcaagttgtcgatattaatgaactgatccgcttt
tttcagcatccggcaaaagcctttgctcaacgacacttgcagttgttctttgaaagccac
gaaacacaacttgatgatactgaaccattcagtgaaaacttcttgcagagttatttgtta
cgtcaacagctgttagcgctttatctcgtgggtagcagcgaagatgagatttcttctgcg
gtaagtgcggcaggggtgagcggcgtttttcctgatttacccagtacccatgatagtcta
gagcgctggcgtgatgatagtgaaacctttagtgaattcattcaaagtcaaagccaatta
accaacgacagcttaccgataacgtttatcaataccgagcttgatgtggtgcttagcgat
aacagtcattttaccctcagtgctaatttcccggtgcaagcggacagcttaatgttttat
cgcagctcttcggcaaaaggcaaagacttgtttggcctttatctacatcaaattattatg
cagtgctggcaagcaaataccgcgaacttaaatgcggctcatttaaccgaagagcaaaat
atgcttgcgcaggtgaatgtcactaaaggtttttattttgatactaaaaatcaaaaacca
acacagtaccgttttagtaaaatagacaatgcccaggcacaactcgcttttattgttgag
acctatcttaaagggcaacagcaagctttattacttaatactgaattgattgaaaaattc
tttaaagctaaagcctttgcgcaaagtagctttgaaaaactatggtctgacagtggcagc
atgcttagcgtggtaaaacccctaggacaagacccttatatgcattatttctggcagcaa
tgtcctgaattttccgagtaccaatcaacattcaccgcactttatcaaccgatgtggcaa
gctcaggagcaaataaaatga
DBGET
integrated database retrieval system
